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WormBase Tree Display for Gene: WBGene00015327

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Name Class

WBGene00015327SMapS_parentSequenceC02B10
IdentityVersion2
NameCGC_namesnpn-1Person_evidenceWBPerson253
Sequence_nameC02B10.2
Molecular_nameC02B10.2
C02B10.2.1
CE24776
Other_nameCELE_C02B10.2Accession_evidenceNDBBX284604
Public_namesnpn-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
231 Aug 2012 11:56:39WBPerson2970Name_changeCGC_namesnpn-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsnpn
AlleleWBVar00424621
WBVar00908698
WBVar01794681
WBVar00250855
WBVar01499754
WBVar01499242
WBVar01499633
WBVar01481837
WBVar01500245
RNASeq_FPKMWBls:0000002 (85)
WBls:0000003 (11)
WBls:0000004 (44)
WBls:0000006252.221From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000006.Hermaphrodite.WBbt:0007833.SRP042619.SRX559705
RNASeq.elegans.WBStrain00000001.WBls:0000006.Hermaphrodite.WBbt:0007833.SRP042619.SRX559706
WBls:0000007 (11)
WBls:000000813.9522From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX085219
410.089From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX145480
56.5998From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000008.Hermaphrodite.WBbt:0007833.SRP000401.SRX085220
WBls:0000010 (15)
WBls:0000013 (11)
WBls:0000014 (19)
WBls:0000015 (24)
WBls:0000017153.325From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004015.SRP029448.SRX343305
203.227From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0008115.SRP029448.SRX343342
28.9044From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004458.SRP029448.SRX343278
30.4572From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343253
34.8566From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343254
46.1905From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0003810.SRP029448.SRX343325
60.287From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004458.SRP029448.SRX343277
61.7824From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004015.SRP029448.SRX343304
81.75From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0004804.SRP029448.SRX343252
9.99198From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000017.Hermaphrodite.WBbt:0003810.SRP029448.SRX343324
WBls:0000020 (16)
WBls:0000021 (17)
WBls:000002320.2722From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000023.Hermaphrodite.WBbt:0007833.SRP015688.SRX185639
WBls:0000024 (70)
WBls:0000027 (15)
WBls:000003111.5599From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX047470
12.017From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103275
18.4374From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103273
27.6404From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103277
5.93696From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103276
7.24199From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX103274
8.16672From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000031.Hermaphrodite.WBbt:0007833.SRP000401.SRX008139
WBls:000003210.7914From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX008138
22.0851From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103983
25.6936From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103985
37.8875From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019178
39.3029From_analysisRNASeq.elegans.WBls:0000032.control_mean
RNASeq.elegans.WBls:0000032.control_median
40.7183From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP058023.SRX1019179
5.77956From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000032.Hermaphrodite.WBbt:0007833.SRP000401.SRX103984
WBls:0000035 (29)
WBls:0000038 (87)
WBls:0000041 (30)
WBls:000005218.9372From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103279
1.99835From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX008140
20.3412From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103272
20.9836From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103280
21.9618From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103269
22.8765From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103271
28.0535From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103278
30.0774From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103270
30.7449From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX103281
5.99198From_analysisRNASeq.elegans.WBStrain00004309.WBls:0000052.Hermaphrodite.WBbt:0007833.SRP000401.SRX037199
WBls:000006310.2942From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426048
10.3401From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426025
104.313From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426018
10.492From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426029
106.143From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426019
10.6671From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426050
10.8408From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426037
10.8509From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426042
110.878From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643418
111.136From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP057263.SRX997493
11.1545From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426023
11.2775From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426020
11.3506From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426044
11.3799From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426035
11.7137From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426033
12.1271From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426027
12.2193From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426021
12.8353From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426031
12.8935From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426028
130.33From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP057263.SRX997495
13.0698From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426022
13.2233From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426034
13.4367From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426049
13.6785From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426024
137.491From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643420
14.2756From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426026
14.5378From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426030
14.6788From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426036
14.7111From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426052
159.445From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643419
16.5215From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426032
16.6317From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103990
17.0702From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426039
18.518From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426038
202.403From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643426
206.193From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643424
206.903From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643425
22.3396From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397086
25.0147From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397084
25.7799From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397085
29.1423From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX047787
31.5423From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Male.WBbt:0007833.SRP034667.SRX397087
35.8299From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426041
37.0905From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426040
40.078From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005175.SRP049412.SRX747678
41.8076From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014007
42.7535From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005175.SRP049412.SRX747677
44.5863From_analysisRNASeq.elegans.WBStrain00000364.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP003783.SRX028193
47.6604From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643421
49.259From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392703
5.48517From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426047
55.8431From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103989
57.2847From_analysisRNASeq.elegans.WBStrain00000030.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494556
58.3573From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014009
58.4354From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397091
58.4781From_analysisRNASeq.elegans.WBStrain00000031.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494553
59.8381From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494547
60.9505From_analysisRNASeq.elegans.WBStrain00024040.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP015918.SRX189886
61.609From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494549
63.1752From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426017
63.9314From_analysisRNASeq.elegans.WBStrain00000030.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494557
65.1343From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494548
65.3251From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014008
65.3863From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643422
65.7377From_analysisRNASeq.elegans.WBStrain00000031.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494555
66.0605From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103988
66.3793From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426002
66.5686From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426016
66.6776From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103986
67.2349From_analysisRNASeq.elegans.WBStrain00000030.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494558
67.2898From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426007
68.0155From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX001873
68.687From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397089
69.1404From_analysisRNASeq.elegans.WBStrain00000031.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494554
69.1647From_analysisRNASeq.elegans.WBStrain00000029.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494551
69.551From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426012
70.4074From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426004
70.6516From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426006
70.8003From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426005
72.0159From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426011
7.22506From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426053
72.4508From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP043990.SRX643423
73.4779From_analysisRNASeq.elegans.WBStrain00000029.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494550
74.2306From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103987
74.737From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426010
74.9508From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426013
75.3545From_analysisRNASeq.elegans.WBStrain00000029.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP040269.SRX494552
76.058From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426009
7.69058From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX103991
77.9593From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397090
7.86064From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP049412.SRX747679
79.8598From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426008
8.03683From_analysisRNASeq.elegans.WBStrain00034434.WBls:0000063.Hermaphrodite.WBbt:0005784.SRP049412.SRX747680
81.0476From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Female.WBbt:0007833.SRP034667.SRX397088
8.12646From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426051
8.28384From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426046
82.8921From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426003
8.37337From_analysisRNASeq.elegans.WBStrain00022618.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426045
85.5417From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426014
89.3199From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426015
89.5604From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP015918.SRX189885
93.1976From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP000401.SRX014006
9.97582From_analysisRNASeq.elegans.WBStrain00022651.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP035359.SRX426043
WBls:0000064 (14)
WBls:0000065 (16)
WBls:0000068113.379From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265365
117.219From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265360
117.653From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265363
127.556From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265364
128.064From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265361
99.0563From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000068.Hermaphrodite.WBbt:0007833.SRP021083.SRX265362
WBls:0000131336.106From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343229
340.638From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343228
368.113From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006771.SRP029448.SRX343226
394.802From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343223
423.459From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343220
496.583From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0004015.SRP029448.SRX343227
558.343From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006771.SRP029448.SRX343225
598.385From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343222
785.16From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000131.Hermaphrodite.WBbt:0006876.SRP029448.SRX343221
WBls:0000141341.977From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000141.Hermaphrodite.WBbt:0007833.SRP029448.SRX343161
WBls:0000151 (14)
WBls:0000171 (15)
WBls:0000181303.565From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000181.Hermaphrodite.WBbt:0007833.SRP029448.SRX343164
WBls:0000191245.201From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000191.Hermaphrodite.WBbt:0007833.SRP029448.SRX343165
WBls:0000201 (12)
WBls:0000221178.076From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343265
1e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004015.SRP029448.SRX343290
284.934From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0008115.SRP029448.SRX343334
35.7382From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004015.SRP029448.SRX343291
360.127From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0008115.SRP029448.SRX343333
63.1841From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0003810.SRP029448.SRX343315
68.7339From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0003810.SRP029448.SRX343314
69.9019From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343266
89.0127From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004804.SRP029448.SRX343241
93.2201From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000221.Hermaphrodite.WBbt:0004458.SRP029448.SRX343264
WBls:0000231207.986From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000231.Hermaphrodite.WBbt:0007833.SRP029448.SRX343167
WBls:0000251114.696From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343337
1e-10From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004015.SRP029448.SRX343292
RNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004458.SRP029448.SRX343268
211.372From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0007833.SRP029448.SRX343168
28.3347From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343244
334.792From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343336
487.451From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0008115.SRP029448.SRX343335
64.0669From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343243
78.4732From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0004804.SRP029448.SRX343242
83.6709From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000251.Hermaphrodite.WBbt:0003810.SRP029448.SRX343317
WBls:0000261210.638From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000261.Hermaphrodite.WBbt:0007833.SRP029448.SRX343169
WBls:0000281211.8From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000281.Hermaphrodite.WBbt:0007833.SRP029448.SRX343170
WBls:0000291 (13)
WBls:0000301190.556From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000301.Hermaphrodite.WBbt:0007833.SRP029448.SRX343172
WBls:000031188.9884From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000311.Hermaphrodite.WBbt:0007833.SRP029448.SRX343173
WBls:000032175.9743From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000321.Hermaphrodite.WBbt:0007833.SRP029448.SRX343174
WBls:0000331111.836From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000331.Hermaphrodite.WBbt:0007833.SRP029448.SRX343175
89.8671From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000331.Hermaphrodite.WBbt:0007833.SRP029448.SRX343176
WBls:000035155.8512From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000351.Hermaphrodite.WBbt:0007833.SRP029448.SRX343178
74.5593From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000351.Hermaphrodite.WBbt:0007833.SRP029448.SRX343179
WBls:000036167.3678From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000361.Hermaphrodite.WBbt:0007833.SRP029448.SRX343180
WBls:0000381165.231From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004015.SRP029448.SRX343297
172.807From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0008115.SRP029448.SRX343340
30.8315From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343250
42.3186From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0003810.SRP029448.SRX343320
74.4021From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004458.SRP029448.SRX343275
77.5461From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004015.SRP029448.SRX343299
7.89892From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343248
92.7954From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004458.SRP029448.SRX343274
96.3625From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000381.Hermaphrodite.WBbt:0004804.SRP029448.SRX343249
WBls:000039165.7508From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000391.Hermaphrodite.WBbt:0007833.SRP029448.SRX343181
WBls:000040160.7072From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000401.Hermaphrodite.WBbt:0007833.SRP029448.SRX343182
WBls:000042152.5058From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000421.Hermaphrodite.WBbt:0007833.SRP029448.SRX343184
WBls:000043163.7141From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000431.Hermaphrodite.WBbt:0007833.SRP029448.SRX343185
WBls:000045191.3312From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000451.Hermaphrodite.WBbt:0007833.SRP029448.SRX343186
WBls:000046190.4505From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000461.Hermaphrodite.WBbt:0007833.SRP029448.SRX343187
WBls:0000471109.936From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0007833.SRP029448.SRX343189
122.728From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343300
25.6334From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004804.SRP029448.SRX343251
52.4912From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004458.SRP029448.SRX343276
63.6827From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343301
67.3961From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0008115.SRP029448.SRX343341
83.7193From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000471.Hermaphrodite.WBbt:0004015.SRP029448.SRX343302
WBls:0000491123.423From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000491.Hermaphrodite.WBbt:0007833.SRP029448.SRX343191
WBls:000050196.844From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000501.Hermaphrodite.WBbt:0007833.SRP029448.SRX343192
WBls:000051178.3595From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000511.Hermaphrodite.WBbt:0007833.SRP029448.SRX343194
WBls:000052177.0657From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000521.Hermaphrodite.WBbt:0007833.SRP029448.SRX343195
WBls:00005314.71291From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000531.Hermaphrodite.WBbt:0007833.SRP029448.SRX343197
67.1491From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000531.Hermaphrodite.WBbt:0007833.SRP029448.SRX343196
WBls:0000541113.828From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000541.Hermaphrodite.WBbt:0007833.SRP029448.SRX343198
120.522From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000541.Hermaphrodite.WBbt:0007833.SRP029448.SRX343199
WBls:000055176.045From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000551.Hermaphrodite.WBbt:0007833.SRP029448.SRX343200
WBls:000056176.9492From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000561.Hermaphrodite.WBbt:0007833.SRP029448.SRX343201
WBls:000058157.9272From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000581.Hermaphrodite.WBbt:0007833.SRP029448.SRX343202
WBls:0000621134.171From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000621.Hermaphrodite.WBbt:0007833.SRP029448.SRX343203
WBls:0000674113.364From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265371
119.818From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265370
176.964From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265369
238.582From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265366
89.0171From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265368
93.4846From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000674.Hermaphrodite.WBbt:0007833.SRP021083.SRX265367
WBls:0000676115.936From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265372
93.6466From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265374
96.0988From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265373
96.1104From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000676.Hermaphrodite.WBbt:0007833.SRP021083.SRX265375
WBls:000069422.5001From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000694.Hermaphrodite.WBbt:0007833.SRP029448.SRX343205
WBls:000069545.4656From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000695.Hermaphrodite.WBbt:0007833.SRP029448.SRX343206
WBls:00006965.69445From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000696.Hermaphrodite.WBbt:0007833.SRP029448.SRX343207
WBls:000069734.6609From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000697.Hermaphrodite.WBbt:0007833.SRP029448.SRX343208
WBls:000069971.28From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000699.Hermaphrodite.WBbt:0007833.SRP029448.SRX343210
WBls:000070039.0423From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000700.Hermaphrodite.WBbt:0007833.SRP029448.SRX343211
WBls:000070191.3636From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000701.Hermaphrodite.WBbt:0007833.SRP029448.SRX343212
WBls:000070291.3314From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000702.Hermaphrodite.WBbt:0007833.SRP029448.SRX343213
WBls:000070366.6812From_analysisRNASeq.elegans.WBStrain00000001.WBls:0000703.Hermaphrodite.WBbt:0007833.SRP029448.SRX343214
GO_annotation (15)
Ortholog (30)
Structured_descriptionAutomated_descriptionPredicted to enable SNARE binding activity. Involved in endosomal transport and positive regulation of intracellular protein transport. Predicted to be located in synaptic vesicle. Predicted to be part of BLOC-1 complex and BORC complex. Used to study Hermansky-Pudlak syndrome. Is an ortholog of human SNAPIN (SNAP associated protein).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:3753Homo sapiensPaper_evidenceWBPaper00041456
Accession_evidenceOMIM614171
Curator_confirmedWBPerson324
Date_last_updated17 Oct 2018 00:00:00
Disease_relevanceDefective formation of lysosome-related organelles (LROs) underlies the human disease Hermansky-Pudlak syndrome (HPS); the nine genes currently implicated in causing HPS encode subunits of the AP-3, BLOC-1, BLOC-2, or BLOC-3 complexes; BLOC1 is required for normal biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules; C. elegans glo-2 and snpn-1 encode Pallidin and Snapin, which are BLOC-1 subunit homologs, respectively; studies in elegans show that snpn-1 and glo-2 function in trafficking to, and biogenesis of gut granules (gut granules are intestinal cell-specific LROs); snpn-1, but not glo-2 interacts with dsbn-1, which is similar to human dysbindin (DTNBP1), a mammalian BLOC-1 subunit; this system provides an in vivo model to study the genetics and interactions of BLOC1 subunits.Homo sapiensPaper_evidenceWBPaper00041456
Accession_evidenceOMIM614171
607007
Curator_confirmedWBPerson324
Date_last_updated19 Feb 2014 00:00:00
Models_disease_assertedWBDOannot00000097
Molecular_infoCorresponding_CDSC02B10.2
Corresponding_transcriptC02B10.2.1
Other_sequenceCBC01342_1
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00008198Inferred_automaticallyRNAi_primary
WBRNAi00028325Inferred_automaticallyRNAi_primary
WBRNAi00009965Inferred_automaticallyRNAi_primary
WBRNAi00039386Inferred_automaticallyRNAi_primary
Expr_patternExpr1019539
Expr1036564
Expr1143503
Expr2015964
Expr2034199
Drives_constructWBCnstr00017656
WBCnstr00028932
Construct_productWBCnstr00017656
WBCnstr00028932
Microarray_results (20)
Expression_cluster (122)
Interaction (60)
Map_infoMapIVPosition1.44248
PositivePositive_cloneC02B10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00041456
WBPaper00042250
WBPaper00052655
WBPaper00052935
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene