WormBase Tree Display for Gene: WBGene00227726
expand all nodes | collapse all nodes | view schema
WBGene00227726 | SMap | S_parent | Sequence | Bm_v4_ChrX_scaffold_001 | ||
---|---|---|---|---|---|---|
Identity | Version | 11 | ||||
Name | CGC_name | Bma-sax-3 | From_analysis | Inferred_from_orthology | ||
Sequence_name | Bm7465 | |||||
Molecular_name | Bm7465a | |||||
Bm7465a.1 | ||||||
BM39771 | ||||||
Bm7465b | ||||||
BM47477 | ||||||
Bm7465c | ||||||
BM47499 | ||||||
Bm7465b.1 | ||||||
Bm7465c.1 | ||||||
Other_name (11) | ||||||
Public_name | Bma-sax-3 | |||||
Species | Brugia malayi | |||||
History | Version_change (11) | |||||
Acquires_merge | WBGene00220940 | |||||
WBGene00221111 | ||||||
WBGene00232846 | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | sax | |||||
RNASeq_FPKM (11) | ||||||
Contained_in_operon | BMOP2728 | |||||
Ortholog (34) | ||||||
Paralog | WBGene00222569 | Brugia malayi | From_analysis | WormBase-Compara | ||
WBGene00222637 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00223169 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00225216 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00226094 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00227085 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00228273 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00228483 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00231083 | Brugia malayi | From_analysis | WormBase-Compara | |||
WBGene00269356 | Brugia malayi | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Is affected by ivermectin based on RNA-seq studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Immunoglobulin I-set domain; Immunoglobulin I-set; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin subtype 2; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and Immunoglobulin subtype. Is an ortholog of C. elegans sax-3. In C. elegans, sax-3 is involved in generation of neurons and regulation of sensory neuron axon guidance. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Bm7465a | ||||
Bm7465b | ||||||
Bm7465c | ||||||
Corresponding_transcript | Bm7465a.1 | |||||
Bm7465b.1 | ||||||
Bm7465c.1 | ||||||
Other_sequence (35) | ||||||
Experimental_info | Expression_cluster | WBPaper00045439:BM_Cluster_P5 | ||||
WBPaper00049974:ivermectin_100nM_48h_upregulated | ||||||
WBPaper00051007:downregulated_F120_vs_F30 | ||||||
WBPaper00051007:downregulated_F120_vs_F42 | ||||||
WBPaper00051007:downregulated_M120_vs_F120 | ||||||
WBPaper00061765:L3_vs_Adult_Upregulated | ||||||
Reference | WBPaper00045439 | |||||
WBPaper00048750 | ||||||
Remark | [190208 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[200204 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
[210528 pad] The CGC name Bma-sax-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |