WormBase Tree Display for Gene: WBGene00223281

WBGene00223281 SMap: S_parent: Sequence: Bm_v4_Chr2_contig_001
  Identity: Version: 6
    Name: CGC_name: Bma-cpn-2 From_analysis: Inferred_from_orthology
      Sequence_name: Bm3020
      Molecular_name: Bm3020a
        Bm3020a.1
        BM27013
        Bm3020b
        BM47766
        Bm3020b.1
      Other_name: Bm-cpn-2
        TAG3020 Curator_confirmed: WBPerson4055
      Public_name: Bma-cpn-2
    Species: Brugia malayi
    History: Version_change: 1 10 Dec 2012 14:43:24 WBPerson4055 Event: Created
        2 05 Jul 2013 11:43:21 WBPerson4055 Name_change (2)
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:26 WBPerson1983 Name_change: CGC_name: Bma-cpn-2
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Bma-cpn-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cpn
    RNASeq_FPKM (11)
    Ortholog (29)
    Paralog: WBGene00223171 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223447 Brugia malayi From_analysis: WormBase-Compara
      WBGene00223943 Brugia malayi From_analysis: WormBase-Compara
      WBGene00225047 Brugia malayi From_analysis: WormBase-Compara
      WBGene00226271 Brugia malayi From_analysis: WormBase-Compara
      WBGene00231502 Brugia malayi From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Calponin family repeat; Calponin repeat; Smooth muscle protein/calponin; CH domain superfamily; Calponin homology domain; and Calponin homology (CH) domain. Is an ortholog of C. elegans cpn-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Bm3020a
      Bm3020b
    Corresponding_transcript: Bm3020a.1
      Bm3020b.1
    Other_sequence: CR06666
      JI460043.1
      JI212853.1
      Oden_isotig07250
      ACC03235_1
      Oden_isotig07249
      BM00150
      MH07530
      MHC00442_1
      MJC00545_1
      Name_isotig00604
      Acan_isotig11353
      MH01928
      OF01082
      Oden_isotig07254
      HBC04773_1
      JI474885.1
      Oden_isotig07251
      PT03038
      EX010145.1
      BUC00870_1
      CB039043.1
      PPC17229_1
      GP01754
      TDC00544_1
      Oden_isotig07253
      MJ01043
      CR11692
      Oden_isotig07252
      EX010589.1
      MH09917
      MHC07738_1
      ES741882.1
      BMC18225_1
      EX911755.1
      Dviv_isotig23264
      Tcir_isotig07995
      FF681376.1
      EX561099.1
      PT04522
      Name_isotig08749
      Hbac_isotig03334
  Experimental_info: Expression_cluster: WBPaper00051007:downregulated_F30_vs_L4
      WBPaper00051007:downregulated_M30_vs_F30
      WBPaper00051007:upregulated_F120_vs_F30
      WBPaper00051007:upregulated_F120_vs_F42
      WBPaper00061765:L3_vs_Adult_Downregulated
      WBPaper00061765:L4_vs_Adult_Downregulated
      WBPaper00061765:L4_vs_Micro_Downregulated
  Reference: WBPaper00050934
  Remark: [190208 pad] The CGC name Bma-cpn-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Bma-cpn-2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene