WormBase Tree Display for Gene: WBGene00143145

WBGene00143145 SMap: S_parent: Sequence: Cbre_Contig99
  Identity: Version: 1
    Name: CGC_name: Cbn-tmd-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN04420
      Molecular_name: CBN04420
        CBN04420.1
        CN09041
      Other_name: CBN04420
      Public_name: Cbn-tmd-2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-tmd-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tmd
    RNASeq_FPKM: WBls:0000002 0.251251 From_analysis: RNASeq.brenneri.WBls:0000002.control_median
        0.397589 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.502503 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
        0.504413 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
        0.898082 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0.99637 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.07452 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
      WBls:0000004 1.42457 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        2.84915 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 11.584 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        11.9861 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        12.1355 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        13.5351 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        14.9174 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
      WBls:0000038 5.16744 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        5.63813 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        6.10882 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 2.51177 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        2.82947 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00205729
      00205730
    Ortholog (31)
    Paralog (3)
    Structured_description: Automated_description: Predicted to enable tropomyosin binding activity. Predicted to be involved in pointed-end actin filament capping. Is an ortholog of C. elegans tmd-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN04420
    Corresponding_transcript: CBN04420.1
    Other_sequence: CBC09149_1
      ASC35024_1
      JI472791.1
      HCC00074_1
      HC04682
      Oden_contig11977
      BG467986.1
      HC02536
      JI172721.1
      HC04688
      MIC06171_1
      JI173677.1
      Dviv_isotig28079
      Dviv_contig00981
      FE909525.1
      HCC00115_1
      JI255222.1
      FG619169.1
      JI178418.1
      HCC00080_1
      JO469384.1
      CJC12774_1
      Acan_isotig03844
      Acan_isotig03843
      JI169869.1
      JI170728.1
      FE908892.1
      JI177652.1
      DI01482
      NAC00642_1
      SS00172
      HC05941
      HCC00155_1
      Dviv_isotig27097
  Experimental_info: Microarray_results: GPL14142_CBN04420_1832-1891_0.956_2_A
  Method: Gene