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WormBase Tree Display for Gene: WBGene00057488

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Name Class

WBGene00057488SMapS_parentSequenceCrem_Contig17
IdentityVersion4
NameCGC_nameCre-col-73From_analysisInferred_from_orthology
Sequence_nameCRE11875
Molecular_nameCRE11875
CRE11875.1
RP15369
Other_namecr01.sctg9.wum.215
cr01.sctg9.wum.215.2
Public_nameCre-col-73
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:45:12WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE11875
Other_namecr01.sctg9.wum.215
303 Jul 2008 11:48:40WBPerson4055EventAcquires_mergeWBGene00057489
Name_changeOther_namecr01.sctg9.wum.215.2
404 Jul 2008 11:06:37WBPerson4055Name_changeCGC_nameCre-col-73
Acquires_mergeWBGene00057489
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
RNASeq_FPKMWBls:00000040.095777From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.191555From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (46)
WBls:0000027248.04From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
253.244From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
487.327From_analysisRNASeq.remanei.WBls:0000027.control_median
521.255From_analysisRNASeq.remanei.WBls:0000027.control_mean
721.409From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
862.328From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000382417.19From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2809.99From_analysisRNASeq.remanei.WBls:0000038.control_mean
2966.15From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
RNASeq.remanei.WBls:0000038.control_median
3046.64From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:000004113.5773From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
13.6975From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
14.3103From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
146.894From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
252.245From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
43.4327From_analysisRNASeq.remanei.WBls:0000041.control_median
72.5551From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
85.5465From_analysisRNASeq.remanei.WBls:0000041.control_mean
WBls:0000063 (12)
WBls:0000101127.823From_analysisRNASeq.remanei.total_over_all_stages.control_median
467.998From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00152974
Ortholog (31)
Paralog (183)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-73.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE11875
Corresponding_transcriptCRE11875.1
Other_sequenceCK854904.1
PPC02188_1
AS00129
PP00016
Oden_isotig17598
CK855523.1
CK855340.1
JI178832.1
AS03191
EX010216.1
BU586996.1
Dviv_isotig26267
SS01227
ES411907.1
TDC02712_1
ASC02105_2
GO251651.1
CK850720.1
ASC02080_2
DVC00846_1
Acan_isotig06528
DN190212.1
JI476120.1
PP00220
CK850411.1
DVC00521_1
AS01135
PEC00009_1
MA01792
EX014032.1
JI178764.1
AS01128
Dviv_isotig25416
EV853834.1
Oden_isotig24713
Hbac_isotig03966
FM207739.1
SSC00014_3
PT00648
EU370160.1
AI058152.1
HBC12364_1
GP01440
JI177508.1
BMC08961_1
PP00569
Dviv_isotig24289
CK850446.1
BF599218.1
DN190476.1
JI213650.1
GE638903.1
AS00227
AM744074.1
HCC00242_1
BMC15310_1
EX549623.1
DN190902.1
AS01782
WBC02264_1
TDC01300_1
WBC00107_1
AM744259.1
N21793.1
ES742943.1
AM744356.1
CK850537.1
DN190817.1
DN190168.1
CK855173.1
MP01014
BF824691.1
ES411508.1
PPC00154_1
ASC02276_1
EX546642.1
CK726354.1
AS02705
Oden_isotig26281
SS01585
CK855433.1
AM744883.1
ASC02080_1
ASC00058_1
TDC02418_1
OVC00309_1
ES741873.1
EX910293.1
ASC00058_2
CB037714.1
PE00267
CJC03613_1
ASC00059_1
JI476301.1
FG974845.1
OOC01203_1
AAC00319_1
AW355808.1
AIC00119_1
JI483847.1
EW744501.1
AS02400
ASC02322_1
HC02398
EV851154.1
Hbac_isotig03886
AAC00024_1
AS08549
DN191130.1
DN190452.1
AI216957.1
OVC00180_1
BMC06875_1
JI174753.1
BMC12464_1
AA801471.1
ES413320.1
ASC26348_1
Dviv_isotig23920
ES410984.1
JI477552.1
CJC15042_1
JO468060.1
CK854983.1
TX01737
MAC01110_1
BMC00164_2
CK850516.1
MPC00107_1
AAC00463_1
PTC03585_1
PPC00986_3
CB036796.1
AS01786
SSC03889_1
PPC16815_1
JK314813.1
DN190517.1
DN191042.1
AS00139
TCC01961_1
BXC06840_1
ES409458.1
EV851450.1
AM744523.1
SSC00113_3
PP00015
CJC00167_1
HC02033
HBC19014_1
AI110527.1
CRC08011_1
Oden_isotig12453
TCC00816_1
EX544378.1
DN190603.1
TCC00526_1
SS01588
GO240491.1
EG025643.1
EH005272.1
TX00577
Oden_isotig21781
EX540542.1
TCC02124_1
OOC00514_1
JI479296.1
HBC01133_1
XI03605
AE02111
AM744306.1
PP00412
EX540005.1
Oden_isotig27984
CK855247.1
CBC03515_1
PPC01206_1
BMC00164_1
AJ275491.1
GPC01347_1
BF942767.1
PPC00986_2
JI213591.1
AS00120
AS08518
CK850641.1
EX538773.1
MPC00159_1
PT00355
EX535605.1
HCC01272_1
EV851465.1
BMC06875_2
ES413628.1
DN191093.1
EX911681.1
BXC03884_1
EV851945.1
JI482051.1
AS03052
BU586584.1
EX910270.1
PPC00642_1
EV850200.1
DN190984.1
EV850204.1
BG310630.1
ASC17350_2
AJ275491
EX542981.1
ALC00735_1
OOC00186_1
AM744731.1
CK850549.1
GPC00856_2
CJC16546_1
DN191171.1
MethodGene