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WormBase Tree Display for Gene: WBGene00055212

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Name Class

WBGene00055212SMapS_parentSequenceCrem_Contig97
IdentityVersion4
NameCGC_nameCre-unc-32From_analysisInferred_from_orthology
Sequence_nameCRE12197
Molecular_nameCRE12197
CRE12197.1
RP36848
Other_namecr01.sctg4.wum.558
cr01.sctg4.wum.558.2
Public_nameCre-unc-32
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:45WBPerson2970Name_changeCGC_nameCre-unc-32
303 Jul 2008 11:44:55WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE12197
Other_namecr01.sctg4.wum.558
403 Jul 2008 11:48:39WBPerson4055EventAcquires_mergeWBGene00055213
Name_changeOther_namecr01.sctg4.wum.558.2
Acquires_mergeWBGene00055213
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:0000004101.986From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
106.622From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
111.258From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002712.6558From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
70.1876From_analysisRNASeq.remanei.WBls:0000027.control_mean
82.7348From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
86.0554From_analysisRNASeq.remanei.WBls:0000027.control_median
89.3759From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
95.9838From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003819.7732From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
63.8882From_analysisRNASeq.remanei.WBls:0000038.control_mean
82.266From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
89.6254From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004162.7523From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
65.5265From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
65.7898From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
67.1961From_analysisRNASeq.remanei.WBls:0000041.control_median
68.2106From_analysisRNASeq.remanei.WBls:0000041.control_mean
68.6023From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
71.9897From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
74.6032From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:000010159.1555From_analysisRNASeq.remanei.total_over_all_stages.control_mean
62.2865From_analysisRNASeq.remanei.total_over_all_stages.control_median
GO_annotation00150592
00150593
00150594
00150595
Ortholog (32)
ParalogWBGene00053565Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00075032Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00059467Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00062672Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00075418Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00053564Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00081373Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans unc-32. In C. elegans, unc-32 is involved in several processes, including cholinergic synaptic transmission; defense response to Gram-positive bacterium; and positive regulation of neurotransmitter secretion.Paper_evidenceWBPaper00065943
Curator_confirmed (2)
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE12197
Corresponding_transcriptCRE12197.1
Other_sequenceACC27957_1
SR01889
JI476636.1
Oden_isotig18946
MCC00048_1
BXC03374_1
XI03319
MH04003
MH08071
HG00963
Acan_isotig17836
FC548098.1
MI01422
RS06721
MH03815
FC819356.1
EY463685.1
AJ616456.1
Name_isotig01992
Hbac_isotig00543
FC810152.1
CJC04313_1
RSC02084_1
TSC07889_1
SR04330
RSC03085_1
EX563889.1
ES563764.1
BF400297.1
HG04484
MJ04859
ES410847.1
XIC02850_1
FC548961.1
ES410961.1
CRC06291_1
CR12033
Tcol_isotig16935
Dviv_isotig13922
RS08823
ES561315.1
NAC00347_1
ACC05431_1
SRC01652_1
SS02648
MI03893
Dviv_isotig13919
GO252540.1
RS06720
BG467540.1
ASC01106_1
Dviv_isotig13921
ASC24020_1
Dviv_isotig13920
Tcol_isotig12008
JI175420.1
MHC07739_1
FC546549.1
EX549575.1
JI220521.1
JI479908.1
TIC00279_1
GP02919
GR979134.1
CJC02160_1
Hbac_isotig05655
Acan_isotig09807
ACC37142_1
PPC09481_1
XIC01660_1
HGC11400_1
SRC02190_1
HS00685
MJC03634_1
EY465219.1
AS08080
CBC08252_1
FC815666.1
CR12034
FC543825.1
HBC00133_1
XI03869
MHC00809_1
PT01196
Hbac_isotig00542
HSC00305_1
MC00628
GT571331.1
PPC13084_1
EY467804.1
FC815525.1
EY468107.1
Tcir_isotig17010
CRC01854_1
MHC01135_1
EY473793.1
SSC02919_1
HGC04290_1
MHC10129_1
JI166362.1
OVC08350_1
MIC00978_1
Tcir_isotig09732
MH03814
BU606334.1
AS01642
SC00413
JI166214.1
MHC09751_1
GPC01473_1
MJC03988_1
Experimental_infoExpr_patternExpr1100606
Microarray_results (2)
ReferenceWBPaper00042088
MethodGene