WormBase Tree Display for Gene: WBGene00022865
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| WBGene00022865 | SMap | S_parent | Sequence | ZK1236 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ufbp-1 | Paper_evidence | WBPaper00042074 | |||||
| Sequence_name | ZK1236.7 | ||||||||
| Molecular_name (6) | |||||||||
| Other_name | CELE_ZK1236.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ufbp-1 | ||||||||
| DB_info | Database | AceView | gene | 3J530 | |||||
| WormQTL | gene | WBGene00022865 | |||||||
| WormFlux | gene | WBGene00022865 | |||||||
| NDB | locus_tag | CELE_ZK1236.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022865|UniProtKB=P34623 | |||||||
| family | PTHR13270 | ||||||||
| NCBI | gene | 176194 | |||||||
| RefSeq | protein | NM_001379832.1 | |||||||
| NM_001268030.4 | |||||||||
| SwissProt | UniProtAcc | P34623 | |||||||
| TREEFAM | TREEFAM_ID | TF314645 | |||||||
| UniProt_GCRP | UniProtAcc | P34623 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jun 2013 14:47:04 | WBPerson2970 | Name_change | CGC_name | ufbp-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ufbp | ||||||||
| Allele (53) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043559 | ||||||||
| Contained_in_operon | CEOP3524 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00022865 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Structured_description | Automated_description | Located in nucleus. Expressed in head neurons. Used to study early infantile epileptic encephalopathy. Is an ortholog of human DDRGK1 (DDRGK domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0050709 | Homo sapiens | Paper_evidence | WBPaper00050013 | ||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 27 Sep 2020 00:00:00 | ||||||||
| Models_disease_asserted | WBDOannot00000814 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1236.7a | |||||||
| ZK1236.7b | |||||||||
| Corresponding_transcript | ZK1236.7a.1 | ||||||||
| ZK1236.7b.1 | |||||||||
| Other_sequence | HBC07381_1 | ||||||||
| FC816290.1 | |||||||||
| FG971992.1 | |||||||||
| Dviv_isotig12812 | |||||||||
| Oden_isotig13050 | |||||||||
| FK807382.1 | |||||||||
| Tcir_isotig17931 | |||||||||
| Tcir_isotig16296 | |||||||||
| SS01253 | |||||||||
| SRC07689_1 | |||||||||
| FC810836.1 | |||||||||
| FC542689.1 | |||||||||
| Acan_isotig07488 | |||||||||
| Dviv_isotig12811 | |||||||||
| ACC06364_1 | |||||||||
| JI168163.1 | |||||||||
| HBC04269_1 | |||||||||
| EX556164.1 | |||||||||
| CRC02002_1 | |||||||||
| Hbac_isotig02170 | |||||||||
| Oden_isotig13048 | |||||||||
| EW741300.1 | |||||||||
| FC811034.1 | |||||||||
| EX562974.1 | |||||||||
| EX911342.1 | |||||||||
| AW257702.1 | |||||||||
| Tcol_isotig03930 | |||||||||
| Tcol_isotig03929 | |||||||||
| FC816285.1 | |||||||||
| SSC00272_1 | |||||||||
| FC816508.1 | |||||||||
| Tcol_isotig03928 | |||||||||
| Dviv_isotig12813 | |||||||||
| Oden_isotig13049 | |||||||||
| Tcol_isotig13666 | |||||||||
| EX556191.1 | |||||||||
| Tcir_isotig21663 | |||||||||
| Tcir_isotig08122 | |||||||||
| PPC15457_1 | |||||||||
| PPC13498_1 | |||||||||
| Tcir_isotig16860 | |||||||||
| EW742575.1 | |||||||||
| Name_isotig01238 | |||||||||
| SRC00736_1 | |||||||||
| FC548729.1 | |||||||||
| EW741890.1 | |||||||||
| CR06134 | |||||||||
| OVC03350_1 | |||||||||
| Associated_feature | WBsf651275 | ||||||||
| WBsf667157 | |||||||||
| WBsf993341 | |||||||||
| WBsf993342 | |||||||||
| WBsf1015424 | |||||||||
| WBsf1015425 | |||||||||
| WBsf227138 | |||||||||
| WBsf227139 | |||||||||
| WBsf227140 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00081186 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00059171 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076871 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005476 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059169 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059170 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005674 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021837 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038178 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005871 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9493 | ||||||||
| Expr10621 | |||||||||
| Expr1021557 | |||||||||
| Expr1040117 | |||||||||
| Expr1162588 | |||||||||
| Expr2017745 | |||||||||
| Expr2035884 | |||||||||
| Drives_construct | WBCnstr00017399 | ||||||||
| WBCnstr00023910 | |||||||||
| Construct_product | WBCnstr00014058 | ||||||||
| WBCnstr00023910 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (29) | |||||||||
| Map_info | Map | III | Position | -0.260321 | |||||
| Positive | Positive_clone | ZK1236 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034662 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
