WormBase Tree Display for Gene: WBGene00022025
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| WBGene00022025 | SMap | S_parent | Sequence | Y65B4A | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | cus | |||||
| Allele (153) | ||||||
| Strain | WBStrain00037902 | |||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation | 00091911 | |||||
| 00091912 | ||||||
| 00091913 | ||||||
| 00091914 | ||||||
| 00091915 | ||||||
| 00126201 | ||||||
| 00126202 | ||||||
| Contained_in_operon | CEOP1977 | |||||
| Ortholog (38) | ||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be part of U2 snRNP and U2-type spliceosomal complex. Is an ortholog of human HTATSF1 (HIV-1 Tat specific factor 1). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y65B4A.1 | ||||
| Corresponding_transcript | Y65B4A.1.1 | |||||
| Other_sequence | ACC24018_1 | |||||
| DA04742 | ||||||
| Tcir_isotig27779 | ||||||
| Tcol_isotig08599 | ||||||
| EX554960.1 | ||||||
| EX564227.1 | ||||||
| Tcol_isotig08600 | ||||||
| MP00877 | ||||||
| GW406393.1 | ||||||
| CRC05767_1 | ||||||
| EX566058.1 | ||||||
| Tcir_isotig18999 | ||||||
| WBC01384_1 | ||||||
| MHC03180_1 | ||||||
| Oden_isotig12319 | ||||||
| DAC02352_1 | ||||||
| Oden_isotig23366 | ||||||
| HGC05683_1 | ||||||
| EX559674.1 | ||||||
| FC817205.1 | ||||||
| FK805195.1 | ||||||
| CJC01996_1 | ||||||
| Dviv_isotig21456 | ||||||
| Hbac_isotig00345 | ||||||
| GO240587.1 | ||||||
| SRC00952_1 | ||||||
| MJ04285 | ||||||
| CR00417 | ||||||
| EY468891.1 | ||||||
| MH05100 | ||||||
| SR01578 | ||||||
| MPC00919_1 | ||||||
| JI169139.1 | ||||||
| PVC04609_1 | ||||||
| HG09614 | ||||||
| Oden_isotig12318 | ||||||
| MH06631 | ||||||
| PSC01409_1 | ||||||
| ACC00795_1 | ||||||
| CD455947.1 | ||||||
| MHC10512_1 | ||||||
| CBC03638_1 | ||||||
| Dviv_isotig21457 | ||||||
| Associated_feature | WBsf643026 | |||||
| WBsf217152 | ||||||
| WBsf217153 | ||||||
| Experimental_info | RNAi_result (12) | |||||
| Expr_pattern | Expr1023210 | |||||
| Expr1039679 | ||||||
| Expr1161330 | ||||||
| Expr2008158 | ||||||
| Expr2026398 | ||||||
| Microarray_results (24) | ||||||
| Expression_cluster (105) | ||||||
| Interaction (22) | ||||||
| Map_info | Map | I | Position | -18.6275 | ||
| Positive | Positive_clone | Y65B4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00036244 | |||||
| WBPaper00038491 | ||||||
| WBPaper00055090 | ||||||
| WBPaper00064339 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
