WormBase Tree Display for Gene: WBGene00021088
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WBGene00021088 | SMap | S_parent | Sequence | W08E12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | W08E12.7 | |||||||
Molecular_name | W08E12.7 | ||||||||
W08E12.7.1 | |||||||||
CE21275 | |||||||||
W08E12.7.2 | |||||||||
Other_name | CELE_W08E12.7 | Accession_evidence | NDB | BX284604 | |||||
Public_name | W08E12.7 | ||||||||
DB_info | Database | AceView | gene | 4E61 | |||||
WormQTL | gene | WBGene00021088 | |||||||
WormFlux | gene | WBGene00021088 | |||||||
NDB | locus_tag | CELE_W08E12.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021088|UniProtKB=Q9N5B3 | |||||||
family | PTHR10804 | ||||||||
NCBI | gene | 177097 | |||||||
RefSeq | protein | NM_067910.9 | |||||||
TREEFAM | TREEFAM_ID | TF300010 | |||||||
TrEMBL | UniProtAcc | Q9N5B3 | |||||||
UniProt_GCRP | UniProtAcc | Q9N5B3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (38) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP4617 | ||||||||
Ortholog (44) | |||||||||
Paralog (8) | |||||||||
Structured_description | Automated_description | Expressed in gonad and pharynx. Human PA2G4 enables nucleic acid binding activity; transcription corepressor activity; and ubiquitin protein ligase binding activity. Is predicted to encode a protein with the following domains: PA2G4 family; Winged helix DNA-binding domain superfamily; Proliferation-associated protein 2G4/ARX1; Metallopeptidase family M24; Winged helix-like DNA-binding domain superfamily; Creatinase/aminopeptidase-like; Peptidase M24; and Phosphorylation site. Is an ortholog of human PA2G4 (proliferation-associated 2G4). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | W08E12.7 | |||||||
Corresponding_transcript | W08E12.7.1 | ||||||||
W08E12.7.2 | |||||||||
Other_sequence | HG03936 | ||||||||
FC816304.1 | |||||||||
PP00435 | |||||||||
EX499950.1 | |||||||||
SR00833 | |||||||||
EX911619.1 | |||||||||
GR978020.1 | |||||||||
MH00509 | |||||||||
Dviv_isotig11426 | |||||||||
MJ03296 | |||||||||
CR06564 | |||||||||
GR978142.1 | |||||||||
JI460795.1 | |||||||||
FC815353.1 | |||||||||
Tcir_isotig17872 | |||||||||
Hbac_isotig01223 | |||||||||
JO469038.1 | |||||||||
MHC01897_1 | |||||||||
TM03170 | |||||||||
FC818766.1 | |||||||||
Acan_isotig08151 | |||||||||
HBC00239_1 | |||||||||
Dviv_isotig11424 | |||||||||
FK804622.1 | |||||||||
ES744122.1 | |||||||||
CR07279 | |||||||||
CGC00605_1 | |||||||||
SR00018 | |||||||||
FC815742.1 | |||||||||
FK807413.1 | |||||||||
DAC00079_1 | |||||||||
SRC00308_1 | |||||||||
Tcir_isotig17251 | |||||||||
FC815909.1 | |||||||||
EX010332.1 | |||||||||
FC814848.1 | |||||||||
EX007875.1 | |||||||||
Dviv_isotig11425 | |||||||||
Tcol_isotig18706 | |||||||||
BXC02031_1 | |||||||||
CRC00355_1 | |||||||||
CJC00532_1 | |||||||||
CBC09872_1 | |||||||||
JI175971.1 | |||||||||
ES569716.1 | |||||||||
MIC04924_1 | |||||||||
CGC00650_1 | |||||||||
FK802561.1 | |||||||||
HG11410 | |||||||||
ES739612.1 | |||||||||
HGC02036_1 | |||||||||
CBC01818_1 | |||||||||
PPC01880_1 | |||||||||
XI05430 | |||||||||
FC548767.1 | |||||||||
ES561857.1 | |||||||||
FC810489.1 | |||||||||
MJC03372_1 | |||||||||
TSC07337_1 | |||||||||
SC00772 | |||||||||
FC816288.1 | |||||||||
FG978260.1 | |||||||||
XIC04001_1 | |||||||||
GR16501 | |||||||||
Oden_isotig14089 | |||||||||
ACC07456_1 | |||||||||
Oden_isotig14088 | |||||||||
SSC00444_1 | |||||||||
ES744129.1 | |||||||||
EE724177.1 | |||||||||
Dviv_isotig11427 | |||||||||
HG02135 | |||||||||
FC813048.1 | |||||||||
SC00173 | |||||||||
CR03967 | |||||||||
EX540563.1 | |||||||||
TMC03926_1 | |||||||||
SRC00757_1 | |||||||||
CR02588 | |||||||||
ES563577.1 | |||||||||
SS00622 | |||||||||
EX502954.1 | |||||||||
MI05019 | |||||||||
JI480943.1 | |||||||||
JI459847.1 | |||||||||
ES569704.1 | |||||||||
Associated_feature | WBsf655016 | ||||||||
WBsf977071 | |||||||||
WBsf977072 | |||||||||
WBsf977073 | |||||||||
WBsf977074 | |||||||||
WBsf977075 | |||||||||
WBsf228081 | |||||||||
WBsf228082 | |||||||||
WBsf228083 | |||||||||
Experimental_info | RNAi_result | WBRNAi00036382 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00061904 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089180 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00054987 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00019719 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr7702 | ||||||||
Expr1018825 | |||||||||
Expr1039201 | |||||||||
Expr1158520 | |||||||||
Expr2006857 | |||||||||
Expr2025082 | |||||||||
Drives_construct | WBCnstr00012847 | ||||||||
WBCnstr00024692 | |||||||||
WBCnstr00042402 | |||||||||
Construct_product | WBCnstr00024692 | ||||||||
WBCnstr00042402 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (202) | |||||||||
Interaction (20) | |||||||||
Map_info | Positive | Positive_clone | W08E12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | -4.76979 | |||||||
Reference | WBPaper00024478 | ||||||||
WBPaper00032230 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |