WormBase Tree Display for Gene: WBGene00021074
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WBGene00021074 | SMap | S_parent | Sequence | W07E6 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | gldi | |||||
Allele (59) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00001779 | |||||
00001780 | ||||||
00097677 | ||||||
00097678 | ||||||
00097679 | ||||||
Ortholog (38) | ||||||
Structured_description | Concise_description | W07E6.2 encodes an ortholog of S. cerevisiae RSA4 that may suppress tumorous growth in the germ line by ensuring robust larval germline proliferation; like PRO-1, -2, and -3, W07E6.2 is probably required for ribosome biogenesis, suggesting a link between biogenesis in the distal sheath and control of cell division in the germ line. | Paper_evidence | WBPaper00028280 | ||
WBPaper00028933 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 23 Apr 2008 00:00:00 | |||||
Automated_description | Predicted to be involved in Notch signaling pathway. Predicted to be located in nucleolus. Is an ortholog of human NLE1 (notchless homolog 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | W07E6.2a | ||||
W07E6.2b | ||||||
Corresponding_transcript | W07E6.2a.1 | |||||
W07E6.2b.1 | ||||||
Other_sequence | Dviv_isotig14278 | |||||
JI459436.1 | ||||||
FC812727.1 | ||||||
JI170447.1 | ||||||
HBC04512_1 | ||||||
ACC36896_1 | ||||||
MI05610 | ||||||
MIC05873_1 | ||||||
SS02634 | ||||||
XIC05588_1 | ||||||
EX548220.1 | ||||||
CR06155 | ||||||
FC819474.1 | ||||||
MIC07607_1 | ||||||
CRC00868_1 | ||||||
HCC07130_1 | ||||||
MJ02888 | ||||||
FC812173.1 | ||||||
JI463669.1 | ||||||
BUC01794_1 | ||||||
Tcol_isotig14089 | ||||||
MAC00103_1 | ||||||
FC812159.1 | ||||||
XI04938 | ||||||
Dviv_isotig24766 | ||||||
SSC05893_1 | ||||||
HC05474 | ||||||
FC817787.1 | ||||||
Acan_isotig11373 | ||||||
AI539874.1 | ||||||
DN152734.1 | ||||||
Hbac_isotig02147 | ||||||
FC817771.1 | ||||||
MCC05722_1 | ||||||
GP01183 | ||||||
Dviv_isotig14280 | ||||||
GP02963 | ||||||
Tcir_isotig07559 | ||||||
MA00671 | ||||||
MC04824 | ||||||
FC819978.1 | ||||||
FC813612.1 | ||||||
OVC02784_1 | ||||||
Dviv_isotig29198 | ||||||
OF01284 | ||||||
GPC00636_1 | ||||||
BMC10039_1 | ||||||
FC818394.1 | ||||||
OFC00395_1 | ||||||
Tcol_isotig19877 | ||||||
Oden_isotig12411 | ||||||
SRC04038_1 | ||||||
Oden_isotig12410 | ||||||
SR00656 | ||||||
MIC04747_1 | ||||||
Associated_feature | WBsf649825 | |||||
WBsf665327 | ||||||
WBsf665328 | ||||||
WBsf986418 | ||||||
WBsf1011400 | ||||||
WBsf222609 | ||||||
WBsf222610 | ||||||
Experimental_info | RNAi_result (15) | |||||
Expr_pattern (5) | ||||||
Microarray_results (18) | ||||||
Expression_cluster (122) | ||||||
Interaction (147) | ||||||
Map_info | Map | II | Position | -15.6026 | ||
Positive | Positive_clone | W07E6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00028280 | |||||
WBPaper00038491 | ||||||
WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |