WormBase Tree Display for Gene: WBGene00020557
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| WBGene00020557 | SMap | S_parent | Sequence | T19B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | aprt-1 | Person_evidence | WBPerson238 | |||||
| Sequence_name | T19B4.3 | ||||||||
| Molecular_name | T19B4.3a | ||||||||
| T19B4.3a.1 | |||||||||
| CE13740 | |||||||||
| T19B4.3b | |||||||||
| CE54564 | |||||||||
| T19B4.3b.1 | |||||||||
| Other_name | 1G247 | Accession_evidence | EMBL | AF303266 | |||||
| CELE_T19B4.3 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | aprt-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | aprt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aprt | ||||||||
| Allele | WBVar02157312 | Inferred_automatically | From strain object: VC3225 | ||||||
| WBVar00639581 | |||||||||
| WBVar00639582 | |||||||||
| WBVar00639583 | |||||||||
| WBVar00639584 | |||||||||
| WBVar01499786 | |||||||||
| WBVar02072790 | |||||||||
| WBVar01475570 | |||||||||
| WBVar01475571 | |||||||||
| WBVar01498959 | |||||||||
| Strain | WBStrain00051082 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP1280 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable AMP binding activity; adenine binding activity; and adenine phosphoribosyltransferase activity. Predicted to be involved in AMP salvage and adenine salvage. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in adenine phosphoribosyltransferase deficiency. Is an ortholog of human APRT (adenine phosphoribosyltransferase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0060350 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:626) | ||||
| Molecular_info | Corresponding_CDS | T19B4.3a | |||||||
| T19B4.3b | |||||||||
| Corresponding_transcript | T19B4.3a.1 | ||||||||
| T19B4.3b.1 | |||||||||
| Other_sequence | Tcir_isotig06487 | ||||||||
| EY462660.1 | |||||||||
| HCC04090_1 | |||||||||
| CRC03140_1 | |||||||||
| PPC06309_1 | |||||||||
| Oden_isotig11042 | |||||||||
| OF00956 | |||||||||
| Name_isotig00222 | |||||||||
| CK855144.1 | |||||||||
| EY462886.1 | |||||||||
| HGC00492_1 | |||||||||
| EY466837.1 | |||||||||
| PVC02928_1 | |||||||||
| AYC00693_1 | |||||||||
| Tcol_isotig05144 | |||||||||
| CK850697.1 | |||||||||
| DVC00635_1 | |||||||||
| CBC03277_1 | |||||||||
| Name_isotig00221 | |||||||||
| EX553971.1 | |||||||||
| JI468603.1 | |||||||||
| WBC01041_1 | |||||||||
| HGC06171_1 | |||||||||
| OFC00826_1 | |||||||||
| EV850619.1 | |||||||||
| CJC05481_1 | |||||||||
| HG01855 | |||||||||
| Oden_isotig11043 | |||||||||
| MPC01397_1 | |||||||||
| DI02140 | |||||||||
| Tcol_isotig05143 | |||||||||
| CK850179.1 | |||||||||
| EV852755.1 | |||||||||
| MC05551 | |||||||||
| DIC01512_1 | |||||||||
| Acan_isotig12575 | |||||||||
| MP00324 | |||||||||
| EY473783.1 | |||||||||
| CK726241.1 | |||||||||
| Oden_isotig11044 | |||||||||
| JI475814.1 | |||||||||
| ACC19414_1 | |||||||||
| AE02409 | |||||||||
| Acan_isotig14042 | |||||||||
| GR12945 | |||||||||
| GT736488.1 | |||||||||
| HG05920 | |||||||||
| MH01090 | |||||||||
| CN477704.1 | |||||||||
| MHC03352_1 | |||||||||
| GRC02027_1 | |||||||||
| EL890513.1 | |||||||||
| WBC01447_1 | |||||||||
| WBC02407_1 | |||||||||
| EV853698.1 | |||||||||
| CD455505.1 | |||||||||
| MCC06385_1 | |||||||||
| HC05240 | |||||||||
| HC06885 | |||||||||
| CN477582.1 | |||||||||
| JI175755.1 | |||||||||
| CK726293.1 | |||||||||
| Tcol_isotig05142 | |||||||||
| ACC23034_1 | |||||||||
| BMC05383_1 | |||||||||
| Associated_feature | WBsf643304 | ||||||||
| WBsf654787 | |||||||||
| WBsf983747 | |||||||||
| WBsf1009854 | |||||||||
| WBsf217694 | |||||||||
| WBsf217695 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022447 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00117096 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053500 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035653 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (5) | |||||||||
| Drives_construct | WBCnstr00025054 | ||||||||
| Construct_product | WBCnstr00025054 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (104) | |||||||||
| Interaction (158) | |||||||||
| Map_info | Positive | Positive_clone | T19B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 0.305997 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
