WormBase Tree Display for Gene: WBGene00020436
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| WBGene00020436 | SMap | S_parent | Sequence | T12A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | amdh-1 | Person_evidence | WBPerson42707 | |||||
| WBPerson917 | |||||||||
| Sequence_name | T12A2.1 | ||||||||
| Molecular_name | T12A2.1 | ||||||||
| T12A2.1.1 | |||||||||
| CE44585 | |||||||||
| Other_name | CELE_T12A2.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | amdh-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 Apr 2021 01:27:01 | WBPerson1983 | Name_change | CGC_name | amdh-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | amdh | ||||||||
| Allele (254) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (48) | |||||||||
| Structured_description | Automated_description | Predicted to enable imidazolonepropionase activity. Predicted to be involved in histidine catabolic process. Predicted to be located in cytoplasm. Is an ortholog of human AMDHD1 (amidohydrolase domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T12A2.1 | |||||||
| Corresponding_CDS_history | T12A2.1:wp212 | ||||||||
| Corresponding_transcript | T12A2.1.1 | ||||||||
| Other_sequence | GRC04435_1 | ||||||||
| GR17846 | |||||||||
| MC04994 | |||||||||
| MA01970 | |||||||||
| JI171266.1 | |||||||||
| MAC01294_1 | |||||||||
| EX559375.1 | |||||||||
| PT01234 | |||||||||
| ACC10563_1 | |||||||||
| Dviv_isotig19155 | |||||||||
| MCC05793_1 | |||||||||
| PTC01057_1 | |||||||||
| HGC03710_1 | |||||||||
| PT02593 | |||||||||
| Acan_isotig09172 | |||||||||
| JO468057.1 | |||||||||
| Oden_isotig03020 | |||||||||
| Oden_isotig03023 | |||||||||
| MIC02864_1 | |||||||||
| EX554664.1 | |||||||||
| Oden_isotig03021 | |||||||||
| MH04565 | |||||||||
| Oden_isotig03018 | |||||||||
| BE239062.1 | |||||||||
| MI03331 | |||||||||
| EX012128.1 | |||||||||
| Oden_isotig03025 | |||||||||
| FC546810.1 | |||||||||
| JO472512.1 | |||||||||
| MH04566 | |||||||||
| HBC14055_1 | |||||||||
| Oden_isotig03019 | |||||||||
| HG05350 | |||||||||
| MHC02009_1 | |||||||||
| Oden_isotig03024 | |||||||||
| FK670312.1 | |||||||||
| PPC17884_1 | |||||||||
| Oden_isotig03017 | |||||||||
| Oden_isotig03022 | |||||||||
| EX536234.1 | |||||||||
| MCC00416_1 | |||||||||
| PTC02113_1 | |||||||||
| FK670305.1 | |||||||||
| HG08977 | |||||||||
| Oden_isotig03016 | |||||||||
| FC546796.1 | |||||||||
| MC01715 | |||||||||
| Associated_feature | WBsf645257 | ||||||||
| WBsf659043 | |||||||||
| WBsf992692 | |||||||||
| WBsf992693 | |||||||||
| WBsf225078 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1013414 | ||||||||
| Expr1038912 | |||||||||
| Expr1156745 | |||||||||
| Expr2006116 | |||||||||
| Expr2024330 | |||||||||
| Regulate_expr_cluster | WBPaper00064232:amdh-1(uth29)_downregulated | ||||||||
| WBPaper00064232:amdh-1(uth29)_upregulated | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000108874 | ||||||||
| WBInteraction000111143 | |||||||||
| WBInteraction000134313 | |||||||||
| WBInteraction000282862 | |||||||||
| WBInteraction000464857 | |||||||||
| Map_info | Map | III | Position | -1.4071 | |||||
| Positive | Positive_clone | T12A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064232 | |||||||||
| WBPaper00065140 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
