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WormBase Tree Display for Gene: WBGene00019645

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Name Class

WBGene00019645SMapS_parentSequenceK11D12
IdentityVersion2
NameCGC_nameswt-7Paper_evidenceWBPaper00037817
Person_evidenceWBPerson12258
Sequence_nameK11D12.5
Molecular_nameK11D12.5
K11D12.5.1
CE12134
Other_nameCELE_K11D12.5Accession_evidenceNDBBX284605
Public_nameswt-7
DB_infoDatabaseAceViewgene5F508
WormQTLgeneWBGene00019645
WormFluxgeneWBGene00019645
NDBlocus_tagCELE_K11D12.5
PanthergeneCAEEL|WormBase=WBGene00019645|UniProtKB=O44620
familyPTHR10791
NCBIgene178890
RefSeqproteinNM_071948.4
TREEFAMTREEFAM_IDTF313635
TrEMBLUniProtAccO44620
UniProt_GCRPUniProtAccO44620
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:02WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
214 Dec 2010 10:49:16WBPerson2970Name_changeCGC_nameswt-7
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classswt
Allele (32)
RNASeq_FPKM (74)
GO_annotation (15)
Ortholog (45)
ParalogWBGene00002295Caenorhabditis elegansFrom_analysisPanther
WBGene00007384Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010594Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00011190Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00012647Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016922Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019300Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_description (2)
Molecular_infoCorresponding_CDSK11D12.5
Corresponding_transcriptK11D12.5.1
Other_sequenceBMC07277_1
GR978410.1
SC00856
JI169575.1
JK315392.1
Tcir_isotig07544
EX537645.1
Dviv_isotig03387
EX914536.1
EX914365.1
Oden_isotig13067
ACC20458_1
ASC20067_1
ES409415.1
Oden_isotig13066
EX912408.1
EX008733.1
OVC03885_1
PPC10304_1
Dviv_isotig03384
JI459171.1
Hbac_isotig02957
HCC12392_1
AI124244.1
HBC01313_1
OVC07974_1
ACC07050_1
HC01191
EX910919.1
AI132843.1
JK315919.1
Dviv_isotig03385
EX565467.1
JI171771.1
ES413233.1
PPC12673_1
Name_isotig03988
PPC13214_1
AA294300.1
Tcol_isotig14125
OVC00145_1
EV853453.1
EX007020.1
EV852907.1
EX914666.1
BF114603.1
AA736352.1
Dviv_isotig03386
Name_isotig06636
EX015122.1
BXC04567_1
PTC00147_1
EY470972.1
Oden_isotig13065
ES740505.1
PT00906
AS00733
AI381113.1
HBC02520_1
Dviv_isotig03383
ES743683.1
DVC01699_1
Associated_featureWBsf233632
Experimental_infoRNAi_resultWBRNAi00017009Inferred_automaticallyRNAi_primary
WBRNAi00034280Inferred_automaticallyRNAi_primary
WBRNAi00050590Inferred_automaticallyRNAi_primary
WBRNAi00065097Inferred_automaticallyRNAi_primary
Expr_patternExpr1023688
Expr1038483
Expr1154297
Expr2017169
Expr2035305
Drives_constructWBCnstr00025705
Construct_productWBCnstr00025705
Microarray_results (19)
Expression_cluster (158)
InteractionWBInteraction000188156
WBInteraction000315247
WBInteraction000359514
WBInteraction000376566
WBInteraction000406393
WBInteraction000542656
Map_infoMapVPosition-3.5787Error0.002491
PositivePositive_cloneK11D12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028482
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene