WormBase Tree Display for Gene: WBGene00018996
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| WBGene00018996 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name (4) | |||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Predicted to enable pyridoxamine phosphate oxidase activity. Predicted to be involved in pyridoxal phosphate biosynthetic process. Human ortholog(s) of this gene implicated in pyridoxamine 5'-phosphate oxidase deficiency. Is an ortholog of human PNPO (pyridoxamine 5'-phosphate oxidase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111329 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:30260) | ||||
| Molecular_info | Corresponding_CDS | F57B9.1 | |||||||
| Corresponding_CDS_history | F57B9.1:wp208 | ||||||||
| Corresponding_transcript | F57B9.1.1 | ||||||||
| F57B9.1.2 | |||||||||
| Other_sequence | ACC21321_1 | ||||||||
| JI179775.1 | |||||||||
| Dviv_isotig17408 | |||||||||
| DA03299 | |||||||||
| RSC03583_1 | |||||||||
| Name_isotig02024 | |||||||||
| ES564151.1 | |||||||||
| PT02173 | |||||||||
| CJC02332_1 | |||||||||
| EY459875.1 | |||||||||
| HBC06631_1 | |||||||||
| ES565689.1 | |||||||||
| EX558993.1 | |||||||||
| ES273395.1 | |||||||||
| DAC01033_1 | |||||||||
| AM743250.1 | |||||||||
| TSC01077_1 | |||||||||
| Tcol_isotig20609 | |||||||||
| Tcir_isotig03226 | |||||||||
| EX561811.1 | |||||||||
| EX502883.1 | |||||||||
| Acan_isotig11414 | |||||||||
| EX010359.1 | |||||||||
| Dviv_isotig17409 | |||||||||
| JI181516.1 | |||||||||
| EL890548.1 | |||||||||
| EX008443.1 | |||||||||
| HS00060 | |||||||||
| OOC03173_1 | |||||||||
| Hbac_isotig04340 | |||||||||
| ES565120.1 | |||||||||
| Oden_isotig21141 | |||||||||
| PTC01582_1 | |||||||||
| HS00108 | |||||||||
| JO474377.1 | |||||||||
| HSC00054_1 | |||||||||
| EX499809.1 | |||||||||
| PVC02515_1 | |||||||||
| Oden_isotig28359 | |||||||||
| TDC02718_1 | |||||||||
| CBC14128_1 | |||||||||
| EX561049.1 | |||||||||
| RS07284 | |||||||||
| Associated_feature | WBsf645306 | ||||||||
| WBsf654971 | |||||||||
| WBsf225182 | |||||||||
| WBsf225183 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00098202 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033540 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005184 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015877 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048831 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021976 | ||||||||
| Expr1038199 | |||||||||
| Expr1152586 | |||||||||
| Expr2004341 | |||||||||
| Expr2022566 | |||||||||
| Drives_construct | WBCnstr00026139 | ||||||||
| Construct_product | WBCnstr00026139 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (57) | |||||||||
| Map_info | Positive | Positive_clone | F57B9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.873222 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
