WormBase Tree Display for Gene: WBGene00017217

WBGene00017217 SMap: S_parent: Sequence: F07F6
  Identity: Version: 1
    Name: Sequence_name: F07F6.4
      Molecular_name: F07F6.4
        F07F6.4.1
        CE29955
      Other_name: CELE_F07F6.4 Accession_evidence: NDB BX284602
      Public_name: F07F6.4
    DB_info: Database: AceView gene 2F716
        WormQTL gene WBGene00017217
        WormFlux gene WBGene00017217
        NDB locus_tag CELE_F07F6.4
        Panther gene CAEEL|WormBase=WBGene00017217|UniProtKB=Q09531
          family PTHR45686
        NCBI gene 173927
        RefSeq protein NM_062628.7
        SwissProt UniProtAcc Q09531
        TREEFAM TREEFAM_ID TF313985
        UniProt_GCRP UniProtAcc Q09531
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (40)
    Strain: WBStrain00001268
      WBStrain00002258
    RNASeq_FPKM (74)
    GO_annotation: 00054603
      00054604
      00054605
      00054606
      00105677
      00122648
    Contained_in_operon: CEOP2182
    Ortholog (43)
    Paralog: WBGene00000565 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00000566 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008805 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010500 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012359 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017760 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTPase activator activity and metal ion binding activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in Golgi membrane. Is an ortholog of human ARFGAP2 (ADP ribosylation factor GTPase activating protein 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F07F6.4
    Corresponding_transcript: F07F6.4.1
    Other_sequence: SS00682
      FK805927.1
      Dviv_isotig10893
      DAC00352_1
      SR02565
      EX559657.1
      AE03222
      FC544110.1
      FC550219.1
      Tcir_isotig11949
      EX537467.1
      Oden_isotig10694
      Acan_isotig03319
      Name_isotig04291
      ACC11166_1
      Hbac_isotig00259
      CB038001.1
      EX552818.1
      AA190244.1
      FK809497.1
      FC548565.1
      TDC01131_1
      PPC10338_1
      FC821304.1
      PPC04932_1
      Tcir_contig01053
      CSC01290_1
      DA05239
      Hbac_isotig04165
      Tcol_isotig13694
      PPC20766_1
      FC821918.1
      ACC14646_1
      NBC04327_1
      SRC05257_1
      Acan_isotig03318
      FC821328.1
      ES739379.1
      CRC03341_1
      JI170090.1
      WBC00093_1
      FD514301.1
      TSC11088_1
      NB07076
      Dviv_isotig10894
      HGC01666_1
      CR00519
      EY459989.1
      CGC01375_1
      SR03976
      EX554159.1
      SSC02900_1
      FC821944.1
      AS10855
      ES410718.1
      EX565107.1
      FK808105.1
      NAC00236_1
      ASC02797_1
      Oden_isotig10693
      Hbac_isotig00260
      JI168188.1
      HG02696
      FC810800.1
      PP00788
      SR04006
      SRC02782_1
      ES567134.1
    Associated_feature: WBsf665530
      WBsf987881
  Experimental_info: RNAi_result: WBRNAi00091209 Inferred_automatically: RNAi_primary
      WBRNAi00091208 Inferred_automatically: RNAi_primary
      WBRNAi00012835 Inferred_automatically: RNAi_primary
      WBRNAi00043918 Inferred_automatically: RNAi_primary
      WBRNAi00090865 Inferred_automatically: RNAi_primary
      WBRNAi00098438 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram40
      Chronogram859
      Expr5673
      Expr1022187
      Expr1037396
      Expr1147891
      Expr2002261
      Expr2020481
    Drives_construct: WBCnstr00002163
      WBCnstr00002972
      WBCnstr00027479
    Construct_product: WBCnstr00027479
    Microarray_results (12)
    Expression_cluster (86)
    Interaction (49)
  Map_info: Positive: Positive_clone: F07F6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -1.61205
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene