WormBase Tree Display for Gene: WBGene00016323
expand all nodes | collapse all nodes | view schema
| WBGene00016323 | SMap | S_parent | Sequence | C32E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name (5) | |||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Mar 2020 16:29:37 | WBPerson1983 | Name_change | CGC_name | pmlr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pmlr | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00050028 | ||||||||
| 00050029 | |||||||||
| 00050030 | |||||||||
| 00050031 | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00014011 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00015233 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable mRNA binding activity. Predicted to be involved in miRNA processing. Predicted to be located in nucleus. Is an ortholog of human SNIP1 (Smad nuclear interacting protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C32E8.5 | |||||||
| Corresponding_transcript | C32E8.5.1 | ||||||||
| Other_sequence | Hbac_isotig03728 | ||||||||
| Acan_isotig07522 | |||||||||
| CV200495.1 | |||||||||
| PVC01258_1 | |||||||||
| ES569782.1 | |||||||||
| SR00187 | |||||||||
| CJC02724_1 | |||||||||
| Oden_isotig10400 | |||||||||
| EX563874.1 | |||||||||
| EX500938.1 | |||||||||
| Tcir_isotig32403 | |||||||||
| FC809465.1 | |||||||||
| ES567104.1 | |||||||||
| EX556486.1 | |||||||||
| Dviv_contig08883 | |||||||||
| RS06279 | |||||||||
| RSC01115_1 | |||||||||
| EY463522.1 | |||||||||
| TS03383 | |||||||||
| Acan_isotig15081 | |||||||||
| GRC00409_1 | |||||||||
| JI168848.1 | |||||||||
| RS07421 | |||||||||
| ACC08048_1 | |||||||||
| TSC02377_1 | |||||||||
| CR10087 | |||||||||
| PPC19436_1 | |||||||||
| Tcol_isotig18504 | |||||||||
| EX551901.1 | |||||||||
| ES563576.1 | |||||||||
| SRC05302_1 | |||||||||
| CR10088 | |||||||||
| ES561562.1 | |||||||||
| FC814754.1 | |||||||||
| GR14252 | |||||||||
| BXC01769_1 | |||||||||
| ES569542.1 | |||||||||
| CRC04103_1 | |||||||||
| Dviv_isotig14287 | |||||||||
| Dviv_isotig14288 | |||||||||
| TSC00014_1 | |||||||||
| TSC08837_1 | |||||||||
| CBC04387_1 | |||||||||
| Oden_isotig10398 | |||||||||
| TS01224 | |||||||||
| BXC06303_1 | |||||||||
| FC809674.1 | |||||||||
| FC814993.1 | |||||||||
| Associated_feature | WBsf643155 | ||||||||
| WBsf217429 | |||||||||
| WBsf217430 | |||||||||
| WBsf217431 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00024701 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041691 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070959 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116792 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003059 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033326 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111895 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024700 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012917 | ||||||||
| Expr1036985 | |||||||||
| Expr1145712 | |||||||||
| Expr2001317 | |||||||||
| Expr2019540 | |||||||||
| Drives_construct | WBCnstr00028159 | ||||||||
| Construct_product | WBCnstr00028159 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (95) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | I | Position | -2.60146 | |||||
| Positive | Positive_clone | C32E8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005423 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
