WormBase Tree Display for Gene: WBGene00015814

WBGene00015814 SMap: S_parent: Sequence: C16A3
  Identity: Version: 2
    Name: CGC_name: oatr-1 Paper_evidence: WBPaper00040135
      Sequence_name: C16A3.10
      Molecular_name: C16A3.10
        C16A3.10.1
        CE04010
        C16A3.10.2
      Other_name: orn-1 Paper_evidence: WBPaper00040135
        CELE_C16A3.10 Accession_evidence: NDB BX284603
      Public_name: oatr-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Aug 2016 14:35:06 WBPerson2970 Name_change: CGC_name: oatr-1
    Status: Live
  Gene_info (9)
  Disease_info: Experimental_model: DOID:9252 Homo sapiens Paper_evidence: WBPaper00040135
            WBPaper00059575
          Curator_confirmed: WBPerson324
          Date_last_updated: 13 Mar 2023 00:00:00
    Potential_model: DOID:1415 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8091)
    Disease_relevance: C16A3.10 encodes an ornithine transaminase orthologous to the human gene OAT (ornithine aminotransferase) which when mutated leads to ornithinemia and gyrate atrophy. Homo sapiens Accession_evidence: OMIM 258870
          Curator_confirmed: WBPerson324
          Date_last_updated: 30 Aug 2011 00:00:00
  Models_disease_in_annotation: WBDOannot00000008
  Models_disease_asserted: WBDOannot00001378
  Molecular_info: Corresponding_CDS: C16A3.10
    Corresponding_CDS_history: C16A3.10b:wp255
      C16A3.10c:wp255
    Corresponding_transcript: C16A3.10.1
      C16A3.10.2
    Other_sequence: HGC03048_1
      CBC03508_1
      JI168053.1
      Tcir_isotig00921
      EY461401.1
      AE04481
      Tcir_isotig26195
      CGC00529_1
      Name_isotig06686
      EW744664.1
      EX563520.1
      Tcir_isotig00922
      ES567719.1
      Tcir_isotig10596
      CJC04590_1
      Oden_isotig19546
      EX534738.1
      EY462421.1
      AYC02955_1
      FC543903.1
      EX536399.1
      Tcir_isotig00924
      EY460146.1
      FC550404.1
      DAC01175_1
      FC549973.1
      EX554472.1
      Tcir_isotig00923
      AE04853
      EG025670.1
      EX828364.1
      Hbac_isotig01250
      CGC01195_1
      EY470675.1
      Tcir_isotig10172
      BMC05946_1
      EY470617.1
      EX535419.1
      Dviv_isotig17621
      Tcol_isotig04895
      CJC01908_1
      SR01801
      HG07660
      Name_isotig01345
      ES409717.1
      EX549611.1
      GO252799.1
      FK806315.1
      AE03658
      FC548695.1
      FG978952.1
      Tcir_isotig16869
      Dviv_isotig17620
      FC544393.1
      EY461323.1
      ES568779.1
      ES744244.1
      ACC00498_1
      BUC00923_1
      HBC06199_1
      Tcir_isotig24645
      EX500744.1
      EX538389.1
      EX011546.1
      TSC12326_1
      GE625894.1
      FC551519.1
      Tcol_isotig04894
      EX828079.1
      DA02869
      FG619233.1
      Acan_isotig08845
      HBC07047_1
      FC545630.1
      ACC34718_1
      FC542601.1
      SRC03460_1
      Tcol_isotig04893
      EX007301.1
      TSC10485_1
      HBC01252_1
      EX554220.1
      Tcir_isotig28592
    Associated_feature: WBsf651120
      WBsf666987
      WBsf992744
      WBsf992745
      WBsf992746
      WBsf992747
      WBsf1015085
      WBsf1015086
      WBsf1015087
      WBsf226809
  Experimental_info: RNAi_result: WBRNAi00110479 Inferred_automatically: RNAi_primary
      WBRNAi00110480 Inferred_automatically: RNAi_primary
      WBRNAi00010816 Inferred_automatically: RNAi_primary
      WBRNAi00110478 Inferred_automatically: RNAi_primary
      WBRNAi00028943 Inferred_automatically: RNAi_primary
      WBRNAi00110481 Inferred_automatically: RNAi_primary
      WBRNAi00040651 Inferred_automatically: RNAi_primary
      WBRNAi00005376 Inferred_automatically: RNAi_primary
      WBRNAi00090612 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1413
      Chronogram2045
      Expr5273
      Expr5274
      Expr5275
      Expr1021415
      Expr1036771
      Expr1144706
      Expr2014589
      Expr2032822
    Drives_construct: WBCnstr00002202
      WBCnstr00002203
      WBCnstr00004174
      WBCnstr00004252
      WBCnstr00028545
    Construct_product: WBCnstr00028545
    Regulate_expr_cluster: WBPaper00040135:orn-1(RNAi)_downregulated
      WBPaper00040135:orn-1(RNAi)_upregulated
    Microarray_results (33)
    Expression_cluster (177)
    Interaction (94)
  Map_info: Map: III Position: -1.30449
    Positive: Positive_clone: C16A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00040135
    WBPaper00049828
    WBPaper00055090
    WBPaper00059575
    WBPaper00061536
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene