WormBase Tree Display for Gene: WBGene00012996
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| WBGene00012996 | SMap | S_parent | Sequence | Y48C3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pinn-4 | Paper_evidence | WBPaper00041179 | |||||
| Person_evidence | WBPerson10488 | ||||||||
| Sequence_name | Y48C3A.16 | ||||||||
| Molecular_name | Y48C3A.16 | ||||||||
| Y48C3A.16.1 | |||||||||
| CE22150 | |||||||||
| Other_name | Pin2 | Paper_evidence | WBPaper00026884 | ||||||
| CELE_Y48C3A.16 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | pinn-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Jun 2012 17:03:10 | WBPerson2970 | Name_change | CGC_name | pinn-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pinn | ||||||||
| Allele (102) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP2606 | ||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00022448 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in rRNA processing. Located in plasma membrane. Expressed in head; intestinal cell; and tail. Is an ortholog of human PIN4 (peptidylprolyl cis/trans isomerase, NIMA-interacting 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48C3A.16 | |||||||
| Corresponding_transcript | Y48C3A.16.1 | ||||||||
| Other_sequence | Dviv_isotig13600 | ||||||||
| GO239828.1 | |||||||||
| CA953633.1 | |||||||||
| CR03541 | |||||||||
| Name_isotig08671 | |||||||||
| DN190924.1 | |||||||||
| AS10921 | |||||||||
| JI214742.1 | |||||||||
| JI471340.1 | |||||||||
| TS03586 | |||||||||
| CV200458.1 | |||||||||
| AS11410 | |||||||||
| DN557675.1 | |||||||||
| Tcir_isotig18566 | |||||||||
| PPC05667_1 | |||||||||
| MCC02702_1 | |||||||||
| MC00519 | |||||||||
| NB07944 | |||||||||
| Tcol_isotig06032 | |||||||||
| MPC00851_1 | |||||||||
| TX01486 | |||||||||
| HG04627 | |||||||||
| JI171184.1 | |||||||||
| HS00204 | |||||||||
| CJC03250_1 | |||||||||
| MHC03029_1 | |||||||||
| GR11479 | |||||||||
| JI459011.1 | |||||||||
| JI244771.1 | |||||||||
| RSC00073_1 | |||||||||
| PPC20954_1 | |||||||||
| JI211490.1 | |||||||||
| Oden_isotig28299 | |||||||||
| Tcir_isotig21236 | |||||||||
| DI02212 | |||||||||
| BXC00265_1 | |||||||||
| BMC09105_1 | |||||||||
| DIC01580_1 | |||||||||
| AS07105 | |||||||||
| BXC02246_1 | |||||||||
| MP01941 | |||||||||
| GO250035.1 | |||||||||
| TX01649 | |||||||||
| PTC04199_1 | |||||||||
| MA01197 | |||||||||
| Acan_isotig16308 | |||||||||
| Tcol_isotig06031 | |||||||||
| FG354896.1 | |||||||||
| FE911900.1 | |||||||||
| JK315917.1 | |||||||||
| MPC01507_1 | |||||||||
| JI171368.1 | |||||||||
| JI468923.1 | |||||||||
| JI460221.1 | |||||||||
| HGC11567_1 | |||||||||
| HGC08352_1 | |||||||||
| BM01055 | |||||||||
| MJ01842 | |||||||||
| TX01830 | |||||||||
| PT04582 | |||||||||
| CN477795.1 | |||||||||
| JI480659.1 | |||||||||
| JI482675.1 | |||||||||
| SR02811 | |||||||||
| Tcir_isotig03894 | |||||||||
| HG11070 | |||||||||
| MH10812 | |||||||||
| NBC00292_1 | |||||||||
| JI468815.1 | |||||||||
| LSC00013_1 | |||||||||
| CBC08885_1 | |||||||||
| BMC06168_1 | |||||||||
| SR02547 | |||||||||
| JI171355.1 | |||||||||
| HSC01403_1 | |||||||||
| CRC10162_1 | |||||||||
| MJ05090 | |||||||||
| Tcir_isotig03895 | |||||||||
| HBC08955_1 | |||||||||
| DW718522.1 | |||||||||
| JI246197.1 | |||||||||
| GP01083 | |||||||||
| ACC01353_1 | |||||||||
| ASC20833_1 | |||||||||
| GRC01213_1 | |||||||||
| Dviv_isotig13598 | |||||||||
| AS16991 | |||||||||
| Associated_feature | WBsf222358 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00037240 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00111991 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111987 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056896 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111989 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092996 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111993 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (8) | |||||||||
| Construct_product | WBCnstr00014026 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (72) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | II | Position | 16.8098 | |||||
| Positive | Positive_clone | Y48C3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026884 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041179 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
