WormBase Tree Display for Gene: WBGene00009621
expand all nodes | collapse all nodes | view schema
WBGene00009621 | SMap | S_parent | Sequence | F41E7 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | fipr-21 | Person_evidence | WBPerson168 | |||||
Sequence_name | F41E7.5 | ||||||||
Molecular_name (3) | |||||||||
Other_name | CELE_F41E7.5 | Accession_evidence | NDB | BX284606 | |||||
Public_name | fipr-21 | ||||||||
DB_info | Database | AceView | gene | XK923 | |||||
WormQTL | gene | WBGene00009621 | |||||||
WormFlux | gene | WBGene00009621 | |||||||
NDB | locus_tag | CELE_F41E7.5 | |||||||
NCBI | gene | 181238 | |||||||
RefSeq | protein | NM_077326.6 | |||||||
TrEMBL | UniProtAcc | Q20277 | |||||||
UniProt_GCRP | UniProtAcc | Q20277 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 03 Apr 2007 10:48:52 | WBPerson2970 | Name_change | CGC_name | fipr-21 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | fipr | ||||||||
Allele (11) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00058491 | Caenorhabditis remanei | From_analysis | OMA | |||||
WBGene00131739 | Caenorhabditis japonica | From_analysis | OMA | ||||||
WBGene00036910 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
WBGene00158025 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
chrX_pilon.g19881 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; intestine; seam cell; and sensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including nicotinic acid; rotenone; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F41E7.5 | |||||||
Corresponding_transcript | F41E7.5.1 | ||||||||
Other_sequence | AYC01556_1 | ||||||||
Oden_isotig15000 | |||||||||
FD516108.1 | |||||||||
CJC01565_1 | |||||||||
Oden_isotig14999 | |||||||||
FD515599.1 | |||||||||
FD516124.1 | |||||||||
EX558834.1 | |||||||||
Acan_isotig14187 | |||||||||
CBC00059_1 | |||||||||
CSC00440_1 | |||||||||
ACC33495_1 | |||||||||
AE00379 | |||||||||
Associated_feature | WBsf648461 | ||||||||
WBsf236267 | |||||||||
WBsf236268 | |||||||||
Experimental_info | RNAi_result | WBRNAi00014756 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032100 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00047004 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1010492 | ||||||||
Expr1150868 | |||||||||
Expr2011778 | |||||||||
Expr2030015 | |||||||||
Drives_construct | WBCnstr00032048 | ||||||||
Construct_product | WBCnstr00032048 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (265) | |||||||||
Interaction (14) | |||||||||
Map_info | Map | X | Position | 1.94897 | |||||
Positive | Positive_clone | F41E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064898 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |