WormBase Tree Display for Gene: WBGene00009455
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| WBGene00009455 | SMap | S_parent | Sequence | F36A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | phip-1 | Person_evidence | WBPerson50 | |||||
| Sequence_name | F36A2.8 | ||||||||
| Molecular_name | F36A2.8 | ||||||||
| F36A2.8.1 | |||||||||
| CE32406 | |||||||||
| F36A2.8.2 | |||||||||
| Other_name | CELE_F36A2.8 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | phip-1 | ||||||||
| DB_info | Database | AceView | gene | 1J389 | |||||
| WormQTL | gene | WBGene00009455 | |||||||
| WormFlux | gene | WBGene00009455 | |||||||
| NDB | locus_tag | CELE_F36A2.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009455|UniProtKB=P90861 | |||||||
| family | PTHR12258 | ||||||||
| NCBI | gene | 185336 | |||||||
| RefSeq | protein | NM_001383520.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315158 | |||||||
| TrEMBL | UniProtAcc | P90861 | |||||||
| UniProt_GCRP | UniProtAcc | P90861 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Apr 2010 14:01:37 | WBPerson2970 | Name_change | CGC_name | phip-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | phip | ||||||||
| Allele (54) | |||||||||
| Strain | WBStrain00001858 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00049273 | ||||||||
| 00049274 | |||||||||
| 00049275 | |||||||||
| 00049276 | |||||||||
| 00049277 | |||||||||
| 00049278 | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Enables protein histidine phosphatase activity. Involved in positive regulation of axon regeneration. Predicted to be located in cytosol. Expressed in pharyngeal motor neurons and ventral cord neurons. Is an ortholog of human PHPT1 (phosphohistidine phosphatase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36A2.8 | |||||||
| Corresponding_CDS_history | F36A2.8:wp90 | ||||||||
| Corresponding_transcript | F36A2.8.1 | ||||||||
| F36A2.8.2 | |||||||||
| Other_sequence | Tcir_isotig01729 | ||||||||
| Dviv_isotig07338 | |||||||||
| Oden_isotig08779 | |||||||||
| Oden_isotig12846 | |||||||||
| HGC04599_1 | |||||||||
| TDC00029_1 | |||||||||
| HC02999 | |||||||||
| AS01975 | |||||||||
| Dviv_isotig23412 | |||||||||
| Oden_isotig08781 | |||||||||
| Oden_isotig08782 | |||||||||
| Tcol_isotig01721 | |||||||||
| Tcir_isotig02090 | |||||||||
| Oden_isotig12848 | |||||||||
| HCC00739_1 | |||||||||
| AS00534 | |||||||||
| Oden_isotig12847 | |||||||||
| Oden_isotig09971 | |||||||||
| Oden_isotig29508 | |||||||||
| Tcir_isotig02092 | |||||||||
| Name_isotig06041 | |||||||||
| Tcir_isotig01727 | |||||||||
| Oden_isotig09970 | |||||||||
| CB043794.1 | |||||||||
| Tcir_isotig01730 | |||||||||
| MC04805 | |||||||||
| HG02458 | |||||||||
| Dviv_isotig07339 | |||||||||
| Oden_isotig12845 | |||||||||
| GW408991.1 | |||||||||
| ACC01992_1 | |||||||||
| JI172082.1 | |||||||||
| Tcol_isotig01723 | |||||||||
| AS02268 | |||||||||
| ASC05778_1 | |||||||||
| Tcir_isotig02091 | |||||||||
| Tcol_isotig07928 | |||||||||
| ASC21445_1 | |||||||||
| JO468474.1 | |||||||||
| MCC05707_1 | |||||||||
| Oden_isotig08780 | |||||||||
| JI463960.1 | |||||||||
| Tcol_isotig07927 | |||||||||
| HC04369 | |||||||||
| Oden_isotig09969 | |||||||||
| FE911440.1 | |||||||||
| PSC03138_1 | |||||||||
| HCC02820_1 | |||||||||
| Tcir_isotig01728 | |||||||||
| Acan_isotig14578 | |||||||||
| Associated_feature (4) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00031830 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00116507 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046448 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003607 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00061797 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1755 | ||||||||
| Expr2366 | |||||||||
| Expr5966 | |||||||||
| Expr1021525 | |||||||||
| Expr1034140 | |||||||||
| Expr1150317 | |||||||||
| Expr2014899 | |||||||||
| Expr2033135 | |||||||||
| Drives_construct | WBCnstr00000313 | ||||||||
| WBCnstr00002650 | |||||||||
| WBCnstr00010790 | |||||||||
| WBCnstr00032171 | |||||||||
| Construct_product | WBCnstr00032171 | ||||||||
| Antibody | WBAntibody00001854 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction (16) | |||||||||
| Map_info | Map | I | Position | 3.1788 | Error | 0.006403 | |||
| Positive | Positive_clone | F36A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064616 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
