WormBase Tree Display for Gene: WBGene00008273
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| WBGene00008273 | SMap | S_parent | Sequence | C53B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53B4.3 | |||||||
| Molecular_name | C53B4.3 | ||||||||
| C53B4.3.1 | |||||||||
| CE37333 | |||||||||
| C53B4.3.2 | |||||||||
| Other_name | CELE_C53B4.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C53B4.3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00062322 | ||||||||
| 00062323 | |||||||||
| 00062324 | |||||||||
| 00062325 | |||||||||
| 00116215 | |||||||||
| 00116216 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:3908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10964) | ||||
| DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10964) | ||||||
| DOID:234 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10964) | ||||||
| DOID:4914 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10964) | ||||||
| DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10964) | ||||||
| Disease_relevance | The human ortholog of elegans C53B4.3, SLC22A18 (Solute Carrier Family 22 (Organic Cation Transporter), Member 18), belongs to the family of polyspecific organic-cation transporters located at basolateral and apical surfaces of renal epithelial cells; mutations in SLC22A18/SLC22A1L are associated with several neoplasms including somatic breast cancer, lung cancer, and Rhabdomyosarcoma (a malignant solid tumor arising from mesenchymal tissues which normally differentiate to form striated muscle). | Homo sapiens | Accession_evidence | OMIM | 114480 | ||||
| 211980 | |||||||||
| 268210 | |||||||||
| 602631 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 25 May 2012 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53B4.3 | |||||||
| Corresponding_CDS_history | C53B4.3:wp47 | ||||||||
| C53B4.3:wp131 | |||||||||
| Corresponding_transcript | C53B4.3.1 | ||||||||
| C53B4.3.2 | |||||||||
| Other_sequence | Acan_isotig14024 | ||||||||
| Tcir_isotig01774 | |||||||||
| Oden_isotig20495 | |||||||||
| Tcir_isotig01772 | |||||||||
| JI171945.1 | |||||||||
| FC543575.1 | |||||||||
| Tcir_isotig01773 | |||||||||
| Tcol_isotig06676 | |||||||||
| Oden_isotig22506 | |||||||||
| ACC23248_1 | |||||||||
| Tcol_isotig18210 | |||||||||
| ACC31934_1 | |||||||||
| HCC01175_1 | |||||||||
| Tcir_isotig01771 | |||||||||
| EW743434.1 | |||||||||
| HC03072 | |||||||||
| Associated_feature | WBsf652029 | ||||||||
| WBsf652030 | |||||||||
| WBsf997327 | |||||||||
| WBsf230493 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012342 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043069 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001508 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081135 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9497 | ||||||||
| Expr1023320 | |||||||||
| Expr1147034 | |||||||||
| Expr2001883 | |||||||||
| Expr2020109 | |||||||||
| Drives_construct | WBCnstr00033094 | ||||||||
| Construct_product | WBCnstr00014062 | ||||||||
| WBCnstr00033094 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000175081 | ||||||||
| Map_info | Positive | Positive_clone | C53B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 3.99993 | |||||||
| Reference | WBPaper00034662 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
