WormBase Tree Display for Gene: WBGene00004120
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WBGene00004120 | SMap | S_parent | Sequence | F29C12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | pqn-32 | Person_evidence | WBPerson625 | |||||
Sequence_name | F29C12.1 | ||||||||
Molecular_name | F29C12.1a | ||||||||
F29C12.1a.1 | |||||||||
CE19820 | |||||||||
F29C12.1b | |||||||||
CE37902 | |||||||||
F29C12.1b.1 | |||||||||
Other_name | CELE_F29C12.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | pqn-32 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pqn | ||||||||
Allele (49) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (27) | |||||||||
Paralog (19) | |||||||||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
WBPaper00012788 | |||||||||
WBPaper00012830 | |||||||||
WBPaper00012882 | |||||||||
WBPaper00012897 | |||||||||
WBPaper00013003 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in hypodermis; interfacial epithelial cell; intestine; and sensory neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-nine chemicals including hydrogen sulfide; Nitric Oxide; and methylmercury hydroxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F29C12.1a | |||||||
F29C12.1b | |||||||||
Corresponding_transcript | F29C12.1a.1 | ||||||||
F29C12.1b.1 | |||||||||
Other_sequence | JI168160.1 | ||||||||
Acan_isotig19335 | |||||||||
Acan_isotig08178 | |||||||||
EY460954.1 | |||||||||
PP01550 | |||||||||
MH02353 | |||||||||
PPC00539_1 | |||||||||
Dviv_isotig16952 | |||||||||
OF00156 | |||||||||
OFC00043_1 | |||||||||
MHC03382_1 | |||||||||
Dviv_isotig16953 | |||||||||
ACC00059_1 | |||||||||
AE00645 | |||||||||
Associated_feature | WBsf644792 | ||||||||
WBsf654921 | |||||||||
WBsf654922 | |||||||||
WBsf658342 | |||||||||
WBsf990328 | |||||||||
WBsf1013566 | |||||||||
WBsf222328 | |||||||||
WBsf222329 | |||||||||
WBsf222330 | |||||||||
WBsf222331 | |||||||||
Experimental_info | RNAi_result | WBRNAi00045907 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014099 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1023612 | ||||||||
Expr1031996 | |||||||||
Expr1149810 | |||||||||
Expr2015047 | |||||||||
Expr2033282 | |||||||||
Microarray_results (23) | |||||||||
Expression_cluster (274) | |||||||||
Interaction (177) | |||||||||
Map_info | Map | II | Position | 14.3984 | Error | 0.039877 | |||
Positive | Positive_clone | F29C12 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064306 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |