WormBase Tree Display for Gene: WBGene00002083
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| WBGene00002083 | SMap | S_parent | Sequence | F57B9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | inf-1 | |||||||
| Sequence_name | F57B9.6 | ||||||||
| Molecular_name | F57B9.6a | ||||||||
| F57B9.6a.1 | |||||||||
| CE01341 | |||||||||
| F57B9.6b | |||||||||
| CE38524 | |||||||||
| F57B9.6b.1 | |||||||||
| Other_name | CeIF | ||||||||
| Ce1F | |||||||||
| CELE_F57B9.6 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | inf-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | inf | ||||||||
| Allele (27) | |||||||||
| Legacy_information | [C.elegansII] NMK. 1.7 kb RNA, encodes DEAD box RNA helicase, probable homolog of eukaryotic initiation factor 4A (71% identity to mouse eIF-4A). [Roussel and Bennett 1992; Seydoux and Fire 1994; KB] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP3404 | ||||||||
| Ortholog (41) | |||||||||
| Paralog (37) | |||||||||
| Structured_description | Concise_description | inf-1 encodes a protein with high similarity to eukaryotic initiation factor 4A. | Curator_confirmed | WBPerson48 | |||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to be located in cytoplasmic stress granule. Expressed in germ line; intestine; and neurons. Is an ortholog of human EIF4A1 (eukaryotic translation initiation factor 4A1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070512 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3284) | ||||
| Molecular_info | Corresponding_CDS | F57B9.6a | |||||||
| F57B9.6b | |||||||||
| Corresponding_CDS_history | F57B9.6:wp142 | ||||||||
| Corresponding_transcript | F57B9.6a.1 | ||||||||
| F57B9.6b.1 | |||||||||
| Other_sequence | GR977793.1 | ||||||||
| FE918417.1 | |||||||||
| ES566650.1 | |||||||||
| ASC38606_1 | |||||||||
| EX913363.1 | |||||||||
| FG977831.1 | |||||||||
| DN557892.1 | |||||||||
| FG970769.1 | |||||||||
| FK806026.1 | |||||||||
| FC551428.1 | |||||||||
| FK803400.1 | |||||||||
| ES741404.1 | |||||||||
| GR977807.1 | |||||||||
| Dviv_contig12245 | |||||||||
| GR978817.1 | |||||||||
| MJ00509 | |||||||||
| TV00875 | |||||||||
| ES412913.1 | |||||||||
| FG979811.1 | |||||||||
| EX502582.1 | |||||||||
| PP00746 | |||||||||
| CGC00808_1 | |||||||||
| HSC00645_1 | |||||||||
| HGC09618_1 | |||||||||
| GR978045.1 | |||||||||
| EX007149.1 | |||||||||
| FG972190.1 | |||||||||
| CGC00446_1 | |||||||||
| GR367880.1 | |||||||||
| EY470060.1 | |||||||||
| MIC06954_1 | |||||||||
| TS00408 | |||||||||
| EX014451.1 | |||||||||
| Tcir_isotig32738 | |||||||||
| HC05057 | |||||||||
| FC817493.1 | |||||||||
| ES563429.1 | |||||||||
| MJC04507_1 | |||||||||
| EX012650.1 | |||||||||
| EX011990.1 | |||||||||
| ES566846.1 | |||||||||
| EX011264.1 | |||||||||
| TVC00105_1 | |||||||||
| MHC01966_1 | |||||||||
| AS10493 | |||||||||
| ES567366.1 | |||||||||
| FF681009.1 | |||||||||
| FF680508.1 | |||||||||
| SRC02952_1 | |||||||||
| FK806963.1 | |||||||||
| BQ804080.1 | |||||||||
| MH02374 | |||||||||
| FK808386.1 | |||||||||
| EX913923.1 | |||||||||
| ES739886.1 | |||||||||
| TS01431 | |||||||||
| LSC00686_1 | |||||||||
| ES743509.1 | |||||||||
| FG976723.1 | |||||||||
| GR978158.1 | |||||||||
| ES411217.1 | |||||||||
| FC812680.1 | |||||||||
| ES565842.1 | |||||||||
| EX913786.1 | |||||||||
| EY459200.1 | |||||||||
| TV00712 | |||||||||
| EX010328.1 | |||||||||
| HC01313 | |||||||||
| BUC01757_1 | |||||||||
| SR00911 | |||||||||
| CR01198 | |||||||||
| HBC26638_1 | |||||||||
| ASC02329_1 | |||||||||
| GO252454.1 | |||||||||
| PPC02577_1 | |||||||||
| Tcir_isotig18347 | |||||||||
| FC817810.1 | |||||||||
| FG970929.1 | |||||||||
| FE918404.1 | |||||||||
| EX014373.1 | |||||||||
| OVC00090 | |||||||||
| EX007716.1 | |||||||||
| EX012106.1 | |||||||||
| ACC09915_1 | |||||||||
| FK800056.1 | |||||||||
| MC01854 | |||||||||
| PSC04200_1 | |||||||||
| ES409110.1 | |||||||||
| FK803732.1 | |||||||||
| FG977961.1 | |||||||||
| FC818337.1 | |||||||||
| HS01413 | |||||||||
| HG02171 | |||||||||
| BQ804126.1 | |||||||||
| HBC02417_1 | |||||||||
| CBC00139_1 | |||||||||
| ES568333.1 | |||||||||
| FG971498.1 | |||||||||
| MI02063 | |||||||||
| BMC04046_1 | |||||||||
| PTC00722_1 | |||||||||
| FG587540.1 | |||||||||
| FF680066.1 | |||||||||
| DN557542.1 | |||||||||
| FC553033.1 | |||||||||
| Tcol_isotig23012 | |||||||||
| MCC00831_1 | |||||||||
| GW409372.1 | |||||||||
| FG971473.1 | |||||||||
| FG980543.1 | |||||||||
| EX911909.1 | |||||||||
| JK314780.1 | |||||||||
| AA294280.1 | |||||||||
| FK803745.1 | |||||||||
| ES744621.1 | |||||||||
| Associated_feature | WBsf659131 | ||||||||
| WBsf659132 | |||||||||
| WBsf225171 | |||||||||
| WBsf225172 | |||||||||
| WBsf225173 | |||||||||
| WBsf225174 | |||||||||
| WBsf225175 | |||||||||
| Experimental_info (7) | |||||||||
| Map_info | Map | III | Position | -0.894974 | Error | 0.001192 | |||
| Positive | Positive_clone | F57B9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| KB#LC2 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (11) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
