WormBase Tree Display for Gene: WBGene00001034
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WBGene00001034 | SMap | S_parent | Sequence | R74 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | dnj-16 | Person_evidence | WBPerson625 | |||||
Sequence_name | R74.4 | ||||||||
Molecular_name | R74.4a | ||||||||
R74.4a.1 | |||||||||
CE01057 | |||||||||
R74.4b | |||||||||
CE43575 | |||||||||
R74.4b.1 | |||||||||
Other_name | CELE_R74.4 | Accession_evidence | NDB | BX284603 | |||||
Public_name | dnj-16 | ||||||||
DB_info | Database | AceView | gene | 3F281 | |||||
WormQTL | gene | WBGene00001034 | |||||||
WormFlux | gene | WBGene00001034 | |||||||
NDB | locus_tag | CELE_R74.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00001034|UniProtKB=C1P627 | |||||||
family | PTHR44272 | ||||||||
NCBI | gene | 175540 | |||||||
RefSeq | protein | NM_001267961.2 | |||||||
NM_001267962.2 | |||||||||
TREEFAM | TREEFAM_ID | TF316045 | |||||||
TrEMBL | UniProtAcc | C1P627 | |||||||
Q22028 | |||||||||
UniProt_GCRP | UniProtAcc | C1P627 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dnj | ||||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3865 | ||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00001019 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00001022 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00001031 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00001038 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00001040 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00001042 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00001044 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | This gene encodes a protein containing a DnaJ ('J') domain. | Paper_evidence | WBPaper00012768 | |||||
WBPaper00012859 | |||||||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABplapaaapa; ABprapaaapa; germ line; intestine; and neurons based on RNA-seq; tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and daf-12 based on tiling array; RNA-seq; proteomic; and microarray studies. Is affected by nine chemicals including Zidovudine; Rifampin; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DnaJ domain and Chaperone J-domain superfamily. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R74.4a | |||||||
R74.4b | |||||||||
Corresponding_transcript | R74.4a.1 | ||||||||
R74.4b.1 | |||||||||
Other_sequence | TM01290 | ||||||||
SSC03430_1 | |||||||||
PT00602 | |||||||||
HG02302 | |||||||||
GRC00032_3 | |||||||||
BI772857.1 | |||||||||
MI06019 | |||||||||
CRC05542_1 | |||||||||
AS15645 | |||||||||
GR978002.1 | |||||||||
BI773011.1 | |||||||||
ES562408.1 | |||||||||
CR05531 | |||||||||
BI773098.1 | |||||||||
GP00178 | |||||||||
PTC04026_1 | |||||||||
Oden_isotig17404 | |||||||||
DIC01371_1 | |||||||||
MCC02393_1 | |||||||||
BI773065.1 | |||||||||
EX008683.1 | |||||||||
MI06626 | |||||||||
TS05825 | |||||||||
SSC06170_1 | |||||||||
MIC05542_1 | |||||||||
HGC02481_1 | |||||||||
BXC02287_1 | |||||||||
GR10350 | |||||||||
JO473877.1 | |||||||||
HBC26234_1 | |||||||||
Oden_isotig17403 | |||||||||
NB07373 | |||||||||
BI772891.1 | |||||||||
ASC18893_1 | |||||||||
GPC01008_1 | |||||||||
MI06675 | |||||||||
DI01702 | |||||||||
TSC05054_1 | |||||||||
MC03147 | |||||||||
TMC00897_1 | |||||||||
Hbac_isotig01690 | |||||||||
Dviv_isotig22180 | |||||||||
NBC02240_1 | |||||||||
SC00406 | |||||||||
GPC00941_1 | |||||||||
EX501986.1 | |||||||||
Associated_feature | WBsf645066 | ||||||||
WBsf645067 | |||||||||
WBsf645068 | |||||||||
WBsf224691 | |||||||||
WBsf224692 | |||||||||
Experimental_info | RNAi_result | WBRNAi00106331 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052050 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076624 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034977 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017918 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00005040 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00037129 | ||||||||
Construct_product | WBCnstr00037129 | ||||||||
Microarray_results (22) | |||||||||
Expression_cluster (96) | |||||||||
Interaction (24) | |||||||||
Map_info | Map | III | Position | -3.70053 | Error | 0.002861 | |||
Positive | Positive_clone | R74 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |