WormBase Tree Display for Gene: WBGene00000983
expand all nodes | collapse all nodes | view schema
| WBGene00000983 | SMap | S_parent | Sequence | F35B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | dhs-20 | Person_evidence | WBPerson651 | |||||
| Sequence_name | F35B12.2 | ||||||||
| Molecular_name | F35B12.2 | ||||||||
| F35B12.2.1 | |||||||||
| CE39496 | |||||||||
| Other_name | CELE_F35B12.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | dhs-20 | ||||||||
| DB_info | Database | AceView | gene | 5M84 | |||||
| WormQTL | gene | WBGene00000983 | |||||||
| WormFlux | gene | WBGene00000983 | |||||||
| NDB | locus_tag | CELE_F35B12.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000983|UniProtKB=Q20012 | |||||||
| family | PTHR43313 | ||||||||
| NCBI | gene | 179590 | |||||||
| RefSeq | protein | NM_073540.6 | |||||||
| TrEMBL | UniProtAcc | Q20012 | |||||||
| UniProt_GCRP | UniProtAcc | Q20012 | |||||||
| OMIM | gene | 601617 | |||||||
| 609769 | |||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:22 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhs | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066820 | ||||||||
| 00066821 | |||||||||
| 00066822 | |||||||||
| 00066823 | |||||||||
| Ortholog (61) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Concise_description | dhs-20 encodes a short-chain dehydrogenase predicted to be mitochondrial. | Paper_evidence | WBPaper00004424 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity. Predicted to be involved in steroid metabolic process. Predicted to be located in intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in autosomal recessive congenital ichthyosis 13; fundus albipunctatus; and night blindness. Is an ortholog of several human genes including DHRS9 (dehydrogenase/reductase 9); HSD17B6 (hydroxysteroid 17-beta dehydrogenase 6); and RDH5 (retinol dehydrogenase 5). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080257 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:29958) | ||||
| DOID:11105 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9940) | ||||||
| DOID:8499 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9940) | ||||||
| Molecular_info | Corresponding_CDS | F35B12.2 | |||||||
| Corresponding_CDS_history | F35B12.2:wp87 | ||||||||
| F35B12.2:wp152 | |||||||||
| Corresponding_transcript | F35B12.2.1 | ||||||||
| Other_sequence | BUC00455_1 | ||||||||
| EX552147.1 | |||||||||
| EX011702.1 | |||||||||
| Dviv_isotig25160 | |||||||||
| MI04755 | |||||||||
| Acan_isotig19791 | |||||||||
| JI168263.1 | |||||||||
| ASC18420_1 | |||||||||
| OOC03846_1 | |||||||||
| EX911177.1 | |||||||||
| FE914564.1 | |||||||||
| EX007595.1 | |||||||||
| JO472247.1 | |||||||||
| MIC03584_1 | |||||||||
| EX913201.1 | |||||||||
| HBC11358_1 | |||||||||
| ACC20641_1 | |||||||||
| ES739621.1 | |||||||||
| EX007868.1 | |||||||||
| EG025495.1 | |||||||||
| JI176856.1 | |||||||||
| BXC00012_1 | |||||||||
| JI180277.1 | |||||||||
| Oden_isotig15965 | |||||||||
| HGC11427_1 | |||||||||
| JI474127.1 | |||||||||
| JI175479.1 | |||||||||
| JI175319.1 | |||||||||
| BXC01909_1 | |||||||||
| HBC11251_1 | |||||||||
| ASC29930_1 | |||||||||
| Oden_isotig27721 | |||||||||
| BF599168.1 | |||||||||
| AI124431.1 | |||||||||
| EX914028.1 | |||||||||
| EX916778.1 | |||||||||
| ES740185.1 | |||||||||
| PPC07993_1 | |||||||||
| ASC15616_1 | |||||||||
| JI175797.1 | |||||||||
| FE918974.1 | |||||||||
| AS16268 | |||||||||
| HBC00338_1 | |||||||||
| CBC01352_1 | |||||||||
| Hbac_isotig00437 | |||||||||
| JI225118.1 | |||||||||
| HG04506 | |||||||||
| Acan_isotig14282 | |||||||||
| EX914877.1 | |||||||||
| JI480695.1 | |||||||||
| JI212600.1 | |||||||||
| OVC00959_1 | |||||||||
| JI174137.1 | |||||||||
| CRC05036_1 | |||||||||
| ES744368.1 | |||||||||
| GRC02377_1 | |||||||||
| Oden_isotig15964 | |||||||||
| CR10640 | |||||||||
| FE914522.1 | |||||||||
| ES412243.1 | |||||||||
| Oden_isotig26888 | |||||||||
| EX014058.1 | |||||||||
| ES739569.1 | |||||||||
| AS00780 | |||||||||
| AS07273 | |||||||||
| EX010975.1 | |||||||||
| ACC25662_1 | |||||||||
| EX537589.1 | |||||||||
| AS08209 | |||||||||
| JI172943.1 | |||||||||
| EX009064.1 | |||||||||
| XIC05283_1 | |||||||||
| XI04690 | |||||||||
| JI172552.1 | |||||||||
| Hbac_isotig00436 | |||||||||
| Associated_feature | WBsf653131 | ||||||||
| WBsf669390 | |||||||||
| WBsf234552 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014283 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046270 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046271 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031741 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025422 | ||||||||
| Expr1150162 | |||||||||
| Expr2010904 | |||||||||
| Expr2029143 | |||||||||
| Drives_construct | WBCnstr00037159 | ||||||||
| Construct_product | WBCnstr00037159 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | V | Position | 3.21084 | Error | 0.00022 | |||
| Positive | Positive_clone | F35B12 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (4) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
