WormBase Tree Display for Gene: WBGene00000700

WBGene00000700 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F54D1
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele: WBVar01500079
      WBVar01498996
      WBVar01499925
      WBVar01499585
      WBVar01499586
      WBVar01500245
    RNASeq_FPKM (74)
    GO_annotation: 00018857
      00018858
      00107692
    Ortholog (54)
    Paralog (40)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54D1.2
    Corresponding_CDS_history: F54D1.2:wp196
      F54D1.2:wp231
    Corresponding_transcript: F54D1.2.1
    Other_sequence: Oden_isotig23396
      CRC09271_1
      BMC12468_1
      MHC08368_1
      AM744609.1
      SRC00201_2
      AI110525.1
      MIC08800_1
      AW257744.1
      FC817401.1
      HC03287
      HG11433
      BF599198.1
      MIC07421_1
      HBC27279_1
      AA293977.1
      BE636521.1
      SS01645
      HG12121
      AW288184.1
      CB038018.1
      HG12282
      GP01968
      HG08165
      SRC01274_1
      AI665788.1
      FC817509.1
      SRC03961_1
      HG10168
      AI132739.1
      PT00568
      JI468881.1
      AI096024.1
      SRC00201_1
      HG03518
      EX916286.1
      OVC01742_1
      SSC05672_1
      EX540864.1
      AI124166.1
      MIC08162_1
      NBC00857_1
      EX013559.1
      AA917271.1
      JI465077.1
      SRC07257_1
      HG03522
      MI08924
      HG09743
      TDC02378_1
      SS00588
      MIC08889_1
      FC816612.1
      FC815495.1
      EX557740.1
      NB06624
      HG07451
      SR00562
      PTC01182_1
      MH10472
      SR00955
      BE636503.1
      MI08096
      SRC02551_1
      HG02545
      HBC18155_1
      GP02904
      HG08000
      HGC01143_1
      HCC01564_1
      AW682833.1
      HG11204
    Associated_feature: WBsf229124
  Experimental_info: RNAi_result: WBRNAi00048279 Inferred_automatically: RNAi_primary
      WBRNAi00015595 Inferred_automatically: RNAi_primary
      WBRNAi00032772 Inferred_automatically: RNAi_primary
      WBRNAi00048280 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021644
      Expr1152081
    Drives_construct: WBCnstr00037357
    Construct_product: WBCnstr00037357
    Microarray_results (19)
    Expression_cluster (116)
    SAGE_tag: SAGE:atcaagttcttgatgga Strand: Sense
        Unambiguously_mapped
      SAGE:atcaagttct Strand: Sense
        Unambiguously_mapped
    Interaction (70)
  Map_info: Map: IV Position: 4.93363
    Positive: Positive_clone: F54D1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00055090
    WBPaper00059172
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene