WormBase Tree Display for Gene: WBGene00020269
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| WBGene00020269 | SMap | S_parent | Sequence | T05H4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | erfa-1 | Person_evidence | WBPerson124 | |||||
| Sequence_name | T05H4.6 | ||||||||
| Molecular_name | T05H4.6a | ||||||||
| T05H4.6a.1 | |||||||||
| CE52351 | |||||||||
| T05H4.6b | |||||||||
| CE13279 | |||||||||
| T05H4.6b.1 | |||||||||
| T05H4.6b.2 | |||||||||
| Other_name | phi-21 | Person_evidence | WBPerson2582 | ||||||
| etf-1 | Person_evidence | WBPerson261 | |||||||
| CELE_T05H4.6 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | erfa-1 | ||||||||
| DB_info | Database | AceView | gene | 5G915 | |||||
| WormQTL | gene | WBGene00020269 | |||||||
| WormFlux | gene | WBGene00020269 | |||||||
| NDB | locus_tag | CELE_T05H4.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020269|UniProtKB=O16520 | |||||||
| family | PTHR10113 | ||||||||
| NCBI | gene | 179028 | |||||||
| RefSeq | protein | NM_001356664.2 | |||||||
| NM_001392531.1 | |||||||||
| SwissProt | UniProtAcc | O16520 | |||||||
| UniProt_GCRP | UniProtAcc | O16520 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Sep 2011 16:40:15 | WBPerson2970 | Name_change | CGC_name | etf-1 | ||||
| 3 | 11 Nov 2013 09:06:04 | WBPerson2970 | Name_change | CGC_name | erfa-1 | ||||
| Other_name | etf-1 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | erfa | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00047473 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00028225 | ||||||||
| 00028226 | |||||||||
| 00028227 | |||||||||
| 00028228 | |||||||||
| 00028229 | |||||||||
| 00028230 | |||||||||
| 00028231 | |||||||||
| 00028232 | |||||||||
| 00124940 | |||||||||
| 00124941 | |||||||||
| Contained_in_operon | CEOP5112 | ||||||||
| Ortholog (47) | |||||||||
| Structured_description | Automated_description | Predicted to enable sequence-specific mRNA binding activity and translation release factor activity, codon specific. Predicted to be involved in cytoplasmic translational termination. Predicted to be located in cytosol. Predicted to be part of translation release factor complex. Is an ortholog of human ETF1 (eukaryotic translation termination factor 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05H4.6a | |||||||
| T05H4.6b | |||||||||
| Corresponding_CDS_history | T05H4.6:wp202 | ||||||||
| T05H4.6a:wp142 | |||||||||
| T05H4.6a:wp261 | |||||||||
| T05H4.6b:wp142 | |||||||||
| Corresponding_transcript | T05H4.6a.1 | ||||||||
| T05H4.6b.1 | |||||||||
| T05H4.6b.2 | |||||||||
| Other_sequence | FC819324.1 | ||||||||
| FC820675.1 | |||||||||
| PPC15520_1 | |||||||||
| CRC07223_1 | |||||||||
| BUC01337_1 | |||||||||
| SR04812 | |||||||||
| HBC06402_1 | |||||||||
| ACC21189_1 | |||||||||
| HGC05948_1 | |||||||||
| FC814244.1 | |||||||||
| FC811014.1 | |||||||||
| GW412485.1 | |||||||||
| EX537919.1 | |||||||||
| EX538391.1 | |||||||||
| FC810723.1 | |||||||||
| SSC00333_1 | |||||||||
| FC811490.1 | |||||||||
| FC819066.1 | |||||||||
| FC540160.1 | |||||||||
| BXC02804_1 | |||||||||
| SRC05670_1 | |||||||||
| XIC00171_1 | |||||||||
| GO249925.1 | |||||||||
| FC813272.1 | |||||||||
| FC542746.1 | |||||||||
| FC819139.1 | |||||||||
| ES570572.1 | |||||||||
| FG584940.1 | |||||||||
| FC816166.1 | |||||||||
| EX540268.1 | |||||||||
| FC819952.1 | |||||||||
| ACC06060_1 | |||||||||
| PTC02239_1 | |||||||||
| CR09700 | |||||||||
| CJC05760_1 | |||||||||
| EX542000.1 | |||||||||
| SS01899 | |||||||||
| Acan_isotig01236 | |||||||||
| HS00260 | |||||||||
| SRC06916_1 | |||||||||
| CV200689.1 | |||||||||
| AYC01959_1 | |||||||||
| CRC11114_1 | |||||||||
| FC813335.1 | |||||||||
| FC553042.1 | |||||||||
| PT02719 | |||||||||
| SR00549 | |||||||||
| AYC04089_1 | |||||||||
| AJ616418.1 | |||||||||
| EX544337.1 | |||||||||
| XI00918 | |||||||||
| PP01596 | |||||||||
| BXC05281_1 | |||||||||
| FC820288.1 | |||||||||
| HG05192 | |||||||||
| EX915417.1 | |||||||||
| AE04680 | |||||||||
| HGC12114_1 | |||||||||
| HSC00813_1 | |||||||||
| CR09701 | |||||||||
| CBC09451_1 | |||||||||
| PPC00593_1 | |||||||||
| EY464015.1 | |||||||||
| FC813630.1 | |||||||||
| CR01285 | |||||||||
| AE00855 | |||||||||
| CGC01272_1 | |||||||||
| FG979820.1 | |||||||||
| FC819491.1 | |||||||||
| FC817031.1 | |||||||||
| FC552246.1 | |||||||||
| EX550252.1 | |||||||||
| TIC00096_1 | |||||||||
| SR00883 | |||||||||
| Hbac_isotig01130 | |||||||||
| JI170653.1 | |||||||||
| PSC02287_1 | |||||||||
| FC813992.1 | |||||||||
| GO240673.1 | |||||||||
| HG08200 | |||||||||
| SRC00329_1 | |||||||||
| FC809569.1 | |||||||||
| TSC08178_1 | |||||||||
| Oden_isotig17438 | |||||||||
| FC813485.1 | |||||||||
| CR02898 | |||||||||
| CRC10180_1 | |||||||||
| FC816485.1 | |||||||||
| FC812710.1 | |||||||||
| JO468040.1 | |||||||||
| PVC01407_1 | |||||||||
| FC818374.1 | |||||||||
| Dviv_isotig17487 | |||||||||
| FG977277.1 | |||||||||
| FC814869.1 | |||||||||
| Associated_feature | WBsf646878 | ||||||||
| WBsf655096 | |||||||||
| WBsf1019802 | |||||||||
| WBsf231875 | |||||||||
| WBsf231876 | |||||||||
| WBsf231877 | |||||||||
| WBsf231878 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052593 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00096904 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009127 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00026208 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108991 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064907 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035244 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071537 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108936 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108826 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00096965 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109045 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00108881 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00085427 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010817 | ||||||||
| Expr1038825 | |||||||||
| Expr1156207 | |||||||||
| Expr2011356 | |||||||||
| Expr2029592 | |||||||||
| Drives_construct | WBCnstr00025250 | ||||||||
| Construct_product | WBCnstr00025250 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (281) | |||||||||
| Map_info | Map | V | Position | -0.173758 | Error | 0.001676 | |||
| Positive | Positive_clone | T05H4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033090 | ||||||||
| WBPaper00035228 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00046427 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
