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WormBase Tree Display for Gene: WBGene00146901

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Name Class

WBGene00146901SMapS_parentSequenceCbre_Contig144
IdentityVersion1
NameCGC_nameCbn-stip-1From_analysisInferred_from_orthology
Sequence_nameCBN08176
Molecular_nameCBN08176
CBN08176.1
CN10966
Other_nameCBN08176
Public_nameCbn-stip-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-stip-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classstip
RNASeq_FPKMWBls:0000002 (11)
WBls:00000040From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
29.1242From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
58.2484From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.9473From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
23.3079From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
23.5906From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
23.6231From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
24.8143From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:000003816.882From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
17.2311From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
17.5803From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (16)
WBls:000010112.9883From_analysisRNASeq.brenneri.total_over_all_stages.control_median
16.4504From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00208785
OrthologWBGene00007412Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00025732Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00053700Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00117747Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00126551Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g7728Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g493Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g18663Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15732Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8948Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27135Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g3134Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6492Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10981Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g14960Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g17702Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g28579Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29645Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6204Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00277.g8344Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-stip-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7905Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7906Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01053.g17980Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_10541Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005203Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08739Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g15215Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20193010Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00117749Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00230688Brugia malayiFrom_analysisWormBase-Compara
chrII_pilon.g5711Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247137Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257355Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00290978Trichuris murisFrom_analysisWormBase-Compara
WBGene00298268Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00156376Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162532Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193482Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity. Is an ortholog of C. elegans stip-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN08176
Corresponding_transcriptCBN08176.1
Other_sequence (17)
Experimental_infoMicroarray_resultsGPL14142_CBN08176_2301-2360_0.953_7_B
MethodGene