WormBase Tree Display for Gene: WBGene00055212

WBGene00055212 SMap: S_parent: Sequence: Crem_Contig97
  Identity: Version: 4
    Name: CGC_name: Cre-unc-32 From_analysis: Inferred_from_orthology
      Sequence_name: CRE12197
      Molecular_name: CRE12197
        CRE12197.1
        RP36848
      Other_name (2)
      Public_name: Cre-unc-32
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:45 WBPerson2970 Name_change: CGC_name: Cre-unc-32
        3 03 Jul 2008 11:44:55 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE12197
                Other_name: cr01.sctg4.wum.558
        4 03 Jul 2008 11:48:39 WBPerson4055 Event: Acquires_merge: WBGene00055213
              Name_change: Other_name: cr01.sctg4.wum.558.2
      Acquires_merge: WBGene00055213
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 101.986 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        106.622 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        111.258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 12.6558 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        70.1876 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        82.7348 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        86.0554 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        89.3759 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        95.9838 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 19.7732 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        63.8882 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        82.266 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        89.6254 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 62.7523 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        65.5265 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        65.7898 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        67.1961 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        68.2106 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        68.6023 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        71.9897 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        74.6032 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 59.1555 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        62.2865 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00150592
      00150593
      00150594
      00150595
    Ortholog: WBGene00006768 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029076 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00132495 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
      WBGene00192253 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00104585 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00193147 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00234199 Brugia malayi From_analysis: WormBase-Compara
      WBGene00133130 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00212986 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00245671 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g5885 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13116 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g13570 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g9004 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21865 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g25896 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g20894 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g6783 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00051.g2654 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-32 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15228 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00078.g3528 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22287 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009304 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06666 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06668 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12681 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5890 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30272100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8500 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00261644 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00289220 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00053565 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00075032 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00059467 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00062672 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00075418 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00053564 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00081373 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans unc-32. In C. elegans, unc-32 is involved in several processes, including cholinergic synaptic transmission; defense response to Gram-positive bacterium; and positive regulation of neurotransmitter secretion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (3)
  Experimental_info: Expr_pattern: Expr1100606
    Microarray_results: GPL14146_CRE12197_2126-2185_0.915_3_B
      GPL14146_CRE12197_2614-2673_0.782_101_A
  Reference: WBPaper00042088
  Method: Gene