WormBase Tree Display for Gene: WBGene00053001

WBGene00053001 SMap: S_parent: Sequence: Crem_Contig13
  Identity: Version: 3
    Name: CGC_name: Cre-myo-5 From_analysis: Inferred_from_orthology
      Sequence_name: CRE05479
      Molecular_name: CRE05479
        CRE05479.1
        RP32406
      Other_name: cr01.sctg1.wum.863
      Public_name: Cre-myo-5
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-myo-5
        3 03 Jul 2008 11:44:39 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE05479
                Other_name: cr01.sctg1.wum.863
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: myo
    RNASeq_FPKM: WBls:0000004 1.49747 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        1.55668 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.6159 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 0.946878 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        10.2908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        7.2944 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        8.15025 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        8.96996 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        9.78968 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
      WBls:0000038 1.62461 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        2.75939 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        3.2391 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        3.41446 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 2.53943 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.87081 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        4.0252 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        4.32423 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        4.5547 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        4.62327 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        6.54163 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        6.72788 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 4.72335 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
        4.82949 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
    GO_annotation: 00148195
      00148196
      00148197
      00148198
    Ortholog: WBGene00019064 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032487 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144181 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129888 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191425 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224821 Brugia malayi From_analysis: WormBase-Compara
      WBGene00243715 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00118520 Pristionchus pacificus From_analysis: WormBase-Compara
      CSP21.g12767 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g22080 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12471 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19052 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8166 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12931 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8220 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6023 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7556 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_06033.g20013 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_10432.g22653 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_16944.g25535 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_20568.g26486 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g16531 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22171 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00098.g4198 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03654 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018758 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05385 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12657 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50102900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14908 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00264058 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292203 Trichuris muris From_analysis: WormBase-Compara
    Paralog (28)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is an ortholog of C. elegans myo-5. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE05479
    Corresponding_transcript: CRE05479.1
    Other_sequence (38)
  Experimental_info: Expr_pattern: Expr1094346
    Microarray_results: GPL14146_CRE05479_4306-4365_0.812_111_C
      GPL14146_CRE05479_4621-4680_0.853_58_B
      GPL14146_CRE05479_4803-4862_0.659_779_A
  Method: Gene