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WormBase Tree Display for Gene: WBGene00044898

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Name Class

WBGene00044898SMapS_parentSequenceT21G5
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classlet
Reference_alleleWBVar00146437
Allele (80)
Legacy_information[C.elegansII] h115 : early to mid-larval lethal. OA3: h389, h527, h727. [Howell et al. 1987; [McKim et al. 1992; KR]
StrainWBStrain00023686
RNASeq_FPKM (74)
OrthologWBGene00033643Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00056180Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g10618Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g8593Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g3017Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16903Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3388Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g6921Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g26954Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19638Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-let-383Caenorhabditis nigoniFrom_analysisWormBase-Compara
FL83_13455Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001855Caenorhabditis remaneiFrom_analysisWormBase-Compara
Sp34_10339800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g1261Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00210661Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in germline precursor cell; hypodermis; intestine; and somatic gonad precursor based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including etr-1; csr-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including rotenone; Zidovudine; and rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS292 version of WormBase
Date_last_updated24 Apr 2024 00:00:00
Molecular_infoCorresponding_CDST21G5.6
Corresponding_transcriptT21G5.6.1
T21G5.6.2
T21G5.6.3
T21G5.6.4
T21G5.6.5
Other_sequenceCJC00286_1
Dviv_isotig32627
Acan_isotig15906
Associated_feature (8)
Experimental_infoRNAi_resultWBRNAi00004248Inferred_automaticallyRNAi_primary
WBRNAi00082644Inferred_automaticallyRNAi_primary
WBRNAi00082560Inferred_automaticallyRNAi_primary
WBRNAi00035770Inferred_automaticallyRNAi_primary
Expr_patternExpr1025234
Expr1040336
Expr1157310
Drives_constructWBCnstr00023338
Construct_productWBCnstr00023338
Microarray_results (26)
Expression_cluster (131)
Map_infoWell_ordered
PositivePositive_cloneT21G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point2547
Multi_point1033
2141
Pos_neg_data2703
5074
5353
6168
6542
4173
Interpolated_map_positionI1.42612
ReferenceWBPaper00000975
WBPaper00001557
WBPaper00002829
WBPaper00003985
WBPaper00040589
MethodGene