WormBase Tree Display for Gene: WBGene00044588
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WBGene00044588 | SMap | S_parent | Sequence | ZK1236 | ||||
---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | ||||||
Name | Sequence_name | ZK1236.9 | ||||||
Molecular_name | ZK1236.9a | |||||||
ZK1236.9a.1 | ||||||||
CE38926 | ||||||||
ZK1236.9b | ||||||||
CE50228 | ||||||||
ZK1236.9b.1 | ||||||||
Other_name | CELE_ZK1236.9 | Accession_evidence | NDB | BX284603 | ||||
Public_name | ZK1236.9 | |||||||
DB_info | Database | AceView | gene | ZK1236.9 | ||||
WormFlux | gene | WBGene00044588 | ||||||
NDB | locus_tag | CELE_ZK1236.9 | ||||||
NCBI | gene | 3896744 | ||||||
RefSeq | protein | NM_001313000.2 | ||||||
NM_001038299.4 | ||||||||
TrEMBL | UniProtAcc | Q45EM0 | ||||||
A0A0K3AUB2 | ||||||||
UniProt_GCRP | UniProtAcc | A0A0K3AUB2 | ||||||
Species | Caenorhabditis elegans | |||||||
History | Version_change | 1 | 11 Jul 2005 17:11:59 | WBPerson1849 | Event | Created | ||
Status | Live | |||||||
Gene_info | Biotype | SO:0001217 | ||||||
Allele (55) | ||||||||
RNASeq_FPKM (74) | ||||||||
Ortholog | WBGene00126293 | Caenorhabditis japonica | From_analysis | TreeFam | ||||
WBGene00142840 | Caenorhabditis brenneri | From_analysis | OMA | |||||
TreeFam | ||||||||
Inparanoid_8 | ||||||||
WormBase-Compara | ||||||||
WBGene00083518 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | ||||||||
Inparanoid_8 | ||||||||
WormBase-Compara | ||||||||
WBGene00037610 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||||
WBGene00227903 | Brugia malayi | From_analysis | WormBase-Compara | |||||
CBOVI.g4363 | Caenorhabditis bovis | From_analysis | WormBase-Compara | |||||
CSP21.g9875 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | |||||
CSP26.g6390 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | |||||
CSP28.g12894 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | |||||
CSP29.g10512 | Caenorhabditis becei | From_analysis | WormBase-Compara | |||||
CSP38.g17539 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | |||||
CSP39.g1997 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | |||||
CSP40.g20706 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | |||||
Cang_2012_03_13_00280.g8405 | Caenorhabditis angaria | From_analysis | WormBase-Compara | |||||
Cni-ZK1236.9 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | |||||
Csp11.Scaffold571.g4277 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | |||||
Csp5_scaffold_00349.g9893 | Caenorhabditis sinica | From_analysis | WormBase-Compara | |||||
GCK72_010154 | Caenorhabditis remanei | From_analysis | WormBase-Compara | |||||
OTIPU.nOt.2.0.1.g04728 | Oscheius tipulae | From_analysis | WormBase-Compara | |||||
Pan_g8783 | Panagrellus redivivus | From_analysis | WormBase-Compara | |||||
Sp34_30080410 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||||
chrIII_pilon.g8404 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00246116 | Onchocerca volvulus | From_analysis | WormBase-Compara | |||||
WBGene00104985 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00262286 | Strongyloides ratti | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00022864 | |||||||
Structured_description | Concise_description | ZK1236.9 encodes a protein with no obvious non-nematode homologs; eitherZK1236.9, or ZK1236.5, or both proteins weakly inhibit DHC-1 in vivo; likewise, either ZK1236.9, or ZK1236.5, or both proteins are required inmass RNAi assays for normal osmoregulation and normally rapid growth. | Paper_evidence | WBPaper00005654 | ||||
WBPaper00006395 | ||||||||
WBPaper00030897 | ||||||||
Curator_confirmed | WBPerson567 | |||||||
Date_last_updated | 26 Aug 2007 00:00:00 | |||||||
Automated_description | Enriched in ABplppppap; ABprppppap; intestine; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by allantoin; Sirolimus; and Cry5B based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | |||||||
WBPerson37462 | ||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||
Molecular_info (4) | ||||||||
Experimental_info | RNAi_result | WBRNAi00005938 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00009457 | Inferred_automatically | RNAi_primary | ||||||
WBRNAi00027042 | Inferred_automatically | RNAi_primary | ||||||
WBRNAi00059167 | Inferred_automatically | RNAi_primary | ||||||
Expr_pattern | Expr1028376 | |||||||
Expr1162589 | ||||||||
Expr2008728 | ||||||||
Expr2026963 | ||||||||
Drives_construct | WBCnstr00023447 | |||||||
Construct_product | WBCnstr00023447 | |||||||
Microarray_results (18) | ||||||||
Expression_cluster (73) | ||||||||
Map_info | Positive | Positive_clone | ZK1236 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Interpolated_map_position | III | -0.26129 | ||||||
Method | Gene |