WormBase Tree Display for Gene: WBGene00032131

WBGene00032131 SMap: S_parent: Sequence: cb25.fpc2397
  Identity: Version: 2
    Name: CGC_name: Cbr-acr-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBG10872
      Molecular_name: CBG10872
        CBG10872.1
        CBP16996
      Other_name: CBG_10872 Accession_evidence: NDB HE601482
      Public_name: Cbr-acr-3
    DB_info: Database: NDB locus_tag CBG_10872
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:01 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-acr-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: acr
    RNASeq_FPKM: WBls:0000002 0.362632 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
        0.632864 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        0.711155 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
        0.824804 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
        0.76798 From_analysis: RNASeq.briggsae.WBls:0000002.control_median
        0.78425 From_analysis: RNASeq.briggsae.WBls:0000002.control_mean
        1.23841 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
      WBls:0000003 0.102464 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
            RNASeq.briggsae.WBls:0000003.control_median
        0.204929 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
            RNASeq.briggsae.WBls:0000003.control_median
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
        0.183339 From_analysis: RNASeq.briggsae.WBls:0000003.control_mean
        0.345089 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
      WBls:0000004 0.544854 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
        0.661906 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
            RNASeq.briggsae.WBls:0000004.control_median
        0.778958 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
        0.88973 From_analysis: RNASeq.briggsae.WBls:0000004.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
        0.894596 From_analysis: RNASeq.briggsae.WBls:0000004.control_mean
        1.00574 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
        1.2537 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
      WBls:0000024 (12)
      WBls:0000027 0.442648 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
        1.55408 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
        4.21958 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
        0.871314 From_analysis: RNASeq.briggsae.WBls:0000027.control_median
        1.29998 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
        1.49055 From_analysis: RNASeq.briggsae.WBls:0000027.control_mean
      WBls:0000035 1.50367 From_analysis: RNASeq.briggsae.WBls:0000035.control_mean
            RNASeq.briggsae.WBls:0000035.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
      WBls:0000038 0.306114 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
        0.342695 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
        0.732642 From_analysis: RNASeq.briggsae.WBls:0000038.control_median
        0.821047 From_analysis: RNASeq.briggsae.WBls:0000038.control_mean
        1.12259 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
        1.51279 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
      WBls:0000041 0.065271 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
        0.072705 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
        0.114605 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.156505 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
        0.176453 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.411333 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
        0.238051 From_analysis: RNASeq.briggsae.WBls:0000041.control_median
        0.26844 From_analysis: RNASeq.briggsae.WBls:0000041.control_mean
        0.319597 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
        0.585227 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
      WBls:0000063 0.183035 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
        0.208891 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.301302 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
        0.560116 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
        0 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
            RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
        0.218152 From_analysis: RNASeq.briggsae.WBls:0000063.control_mean
        0.223747 From_analysis: RNASeq.briggsae.WBls:0000063.control_median
        0.264459 From_analysis: RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
      WBls:0000101 0.411333 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.736049 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
        0.493751 From_analysis: RNASeq.briggsae.total_over_all_stages.control_median
        0.751246 From_analysis: RNASeq.briggsae.total_over_all_stages.control_mean
    GO_annotation: 00135553
      00135554
      00135555
      00135556
      00135557
      00135558
      00135559
      00135560
    Ortholog: WBGene00000043 Caenorhabditis elegans From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00051449 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00141395 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00136067 Caenorhabditis japonica From_analysis: OMA
            WormBase-Compara
      CBOVI.g3235 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13033 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1805 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17481 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2731 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16323 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g8365 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g18763 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-acr-3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold10.g43 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00135.g5281 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_024633 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g7894 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0193220 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19288 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00259986 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00259987 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog (104)
    Structured_description: Automated_description: Predicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans acr-3. In C. elegans, acr-3 is involved in calcium ion import across plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG10872
    Corresponding_CDS_history: CBG10872:bp194
      CBG10872:bp255
    Corresponding_transcript: CBG10872.1
    Other_sequence: Tcol_isotig22689
      FG349275.1
      FG587192.1
      JI179260.1
      GRC02265_1
      JI257357.1
      MH00830
      Dviv_isotig26136
      Acan_isotig14139
      GR13143
  Experimental_info: Expr_pattern: Expr1063458
    Microarray_results: GPL8303_CB6_WBGene00032131_A
      GPL8303_CB6_WBGene00032131_B
      GPL14143_CBG10872_949-1008_0.807_9_C
      GPL14143_CBG10872_1132-1191_0.833_2_A
      GPL14143_CBG10872_1308-1367_0.836_1_B
  Method: Gene