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WormBase Tree Display for Gene: WBGene00022516

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Name Class

WBGene00022516SMapS_parentSequenceZC97
IdentityVersion3
NameCGC_namemtx-2Person_evidenceWBPerson4055
Sequence_nameZC97.1
Molecular_nameZC97.1a
ZC97.1a.1
CE00360
ZC97.1b
CE45721
ZC97.1a.2
ZC97.1b.1
Other_nametag-354Person_evidenceWBPerson201
CELE_ZC97.1Accession_evidenceNDBBX284603
Public_namemtx-2
DB_infoDatabaseAceViewgene3I852
WormQTLgeneWBGene00022516
WormFluxgeneWBGene00022516
NDBlocus_tagCELE_ZC97.1
PanthergeneCAEEL|WormBase=WBGene00022516|UniProtKB=P34599
familyPTHR12289
NCBIgene176087
RefSeqproteinNM_181943.7
NM_066288.7
SwissProtUniProtAccP34599
TREEFAMTREEFAM_IDTF313422
UniProt_GCRPUniProtAccP34599
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:05WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
221 Jun 2005 09:45:25WBPerson2970Name_changeCGC_nametag-354
320 Jul 2007 11:50:19WBPerson2970Name_changeCGC_namemtx-2
Other_nametag-354
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmtx
Allele (27)
Strain (2)
RNASeq_FPKM (74)
GO_annotation00043368
00043369
00043370
00043371
00043372
00043373
00043374
00043375
00043376
00126594
Contained_in_operonCEOP3448
OrthologWBGene00064088Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00023543Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00164161Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00135887Caenorhabditis japonicaFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00041958Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00227606Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4909Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7278Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12230Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g13963Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g3160Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g6548Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9124Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g1709Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g1502Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3120Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00506.g11658Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-mtx-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17232Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02389.g26270Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08010Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009132Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g10961Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30042100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8217Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00207095Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00219050Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00244791Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00304285Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00265182Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00291076Trichuris murisFrom_analysisWormBase-Compara
SGD:S000004664Saccharomyces cerevisiaeFrom_analysisOrthoFinder
Panther
FB:FBgn0030620Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0036920Drosophila melanogasterFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-021210-2Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:7506Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1859652Mus musculusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1306473Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (12)
Structured_descriptionAutomated_descriptionPredicted to be involved in mitochondrion organization. Located in mitochondrion. Is an ortholog of human MTX2 (metaxin 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZC97.1a
ZC97.1b
Corresponding_CDS_historyZC97.1a:wp223
ZC97.1b:wp223
Corresponding_transcriptZC97.1a.1
ZC97.1a.2
ZC97.1b.1
Other_sequence (23)
Associated_featureWBsf667102
WBsf227019
WBsf227020
Experimental_infoRNAi_resultWBRNAi00005534Inferred_automaticallyRNAi_primary
WBRNAi00059030Inferred_automaticallyRNAi_primary
WBRNAi00076865Inferred_automaticallyRNAi_primary
WBRNAi00038106Inferred_automaticallyRNAi_primary
WBRNAi00021766Inferred_automaticallyRNAi_primary
Expr_patternExpr9538
Expr1025743
Expr1039952
Expr1162460
Expr2013821
Expr2032061
Drives_constructWBCnstr00024187
Construct_productWBCnstr00014103
WBCnstr00024187
Microarray_results (22)
Expression_cluster (93)
Interaction (43)
Map_infoMapIIIPosition-0.60674Error0.002603
PositivePositive_cloneZC97Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point5266
4191
Pseudo_map_position
ReferenceWBPaper00038444
WBPaper00038491
WBPaper00041771
WBPaper00055090
WBPaper00060838
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene