WormBase Tree Display for Gene: WBGene00022169

WBGene00022169 SMap: S_parent: Sequence: Y71H2AM
  Identity: Version: 2
    Name (5)
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 16 Jan 2023 18:37:21 WBPerson51134 Name_change: CGC_name: nduc-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nduc
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation: 00091838
      00091839
      00091840
      00126341
      00126342
    Contained_in_operon: CEOP3084
    Ortholog: WBGene00162052 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031339 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00054914 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121704 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00215572 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00227328 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5171 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4461 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17474 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g20481 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23268 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18788 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3078 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g12902 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16472 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8086 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-Y71H2AM.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10200 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15933 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00155.g5811 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22597 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009627 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g08055 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30211100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7160 Caenorhabditis elegans From_analysis: WormBase-Compara
      FB:FBgn0031505 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050320-87 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      HGNC:7706 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      HGNC:42956 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      MGI:1344370 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1307511 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
    Structured_description: Automated_description: Predicted to be involved in mitochondrial electron transport, NADH to ubiquinone. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency. Is an ortholog of human NDUFC2 (NADH:ubiquinone oxidoreductase subunit C2) and NDUFC2-KCTD14 (NDUFC2-KCTD14 readthrough). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112065 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:7706)
  Molecular_info: Corresponding_CDS: Y71H2AM.4
    Corresponding_transcript: Y71H2AM.4.1
    Other_sequence (39)
    Associated_feature: WBsf645000
      WBsf981418
      WBsf991606
      WBsf1014458
      WBsf224552
  Experimental_info: RNAi_result: WBRNAi00071390 Inferred_automatically: RNAi_primary
      WBRNAi00078596 Inferred_automatically: RNAi_primary
      WBRNAi00026952 Inferred_automatically: RNAi_primary
      WBRNAi00078616 Inferred_automatically: RNAi_primary
      WBRNAi00009419 Inferred_automatically: RNAi_primary
      WBRNAi00095815 Inferred_automatically: RNAi_primary
      WBRNAi00058248 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013070
      Expr1039770
      Expr1161667
      Expr2008326
      Expr2026566
    Microarray_results (19)
    Expression_cluster (76)
    Interaction: WBInteraction000551824
      WBInteraction000553277
  Map_info: Map: III Position: -10.1681
    Positive: Positive_clone: Y71H2AM Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene