WormBase Tree Display for Gene: WBGene00021844

WBGene00021844 SMap: S_parent: Sequence: Y54E10BR
  Identity: Version: 2
    Name: CGC_name: sec-11
      Sequence_name: Y54E10BR.5
      Molecular_name: Y54E10BR.5
        Y54E10BR.5.1
        CE22466
      Other_name: Y54E10BR.d Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y54E10BR.5 Accession_evidence: NDB BX284601
      Public_name: sec-11
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Nov 2018 16:28:49 WBPerson1983 Name_change: CGC_name: sec-11
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sec
    Allele (43)
    Strain: WBStrain00049462
    RNASeq_FPKM (74)
    GO_annotation (18)
    Contained_in_operon: CEOP1924
    Ortholog: WBGene00026919 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00057104 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147080 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190356 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00271551 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00227065 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8989 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g762 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2477 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2952 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1734 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8315 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11883 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14046 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5789 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g10795 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00089.g4001 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_04820.g19141 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g1033 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6909 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00740.g15009 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17255 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000909 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06216 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14982 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10149100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g447 Caenorhabditis elegans From_analysis: WormBase-Compara
      nigoni.pc_2016.07.11_034.g28764 Caenorhabditis nigoni From_analysis: WormBase-Compara
      WBGene00237875 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00093076 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00106693 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00305986 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00260480 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302753 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001461 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0262801 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-227 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:17718 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:23400 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:31884 Homo sapiens From_analysis: Inparanoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1929464 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1913536 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:69360 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:628665 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable peptidase activity. Involved in IRE1-mediated unfolded protein response. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of signal peptidase complex. Is an ortholog of human SEC11C (SEC11 homolog C, signal peptidase complex subunit). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y54E10BR.5
    Corresponding_transcript: Y54E10BR.5.1
    Other_sequence (71)
    Associated_feature (4)
  Experimental_info: RNAi_result (30)
    Expr_pattern: Expr1013422
      Expr1039588
      Expr1160800
      Expr2007895
      Expr2026137
    Microarray_results (19)
    Expression_cluster (125)
    Interaction (26)
  Map_info: Positive: Positive_clone: Y54E10BR Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -4.71223
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00058870
    WBPaper00061547
  Method: Gene