WormBase Tree Display for Gene: WBGene00021625

WBGene00021625 SMap: S_parent: Sequence: Y47D7A
  Identity: Version: 1
    Name: Sequence_name: Y47D7A.13
      Molecular_name: Y47D7A.13
        Y47D7A.13.1
        CE22060
      Other_name: Y47D7A.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y47D7A.13 Accession_evidence: NDB BX284605
      Public_name: Y47D7A.13
    DB_info: Database: AceView gene 5E914
        WormQTL gene WBGene00021625
        WormFlux gene WBGene00021625
        NDB locus_tag CELE_Y47D7A.13
        NCBI gene 178841
        RefSeq protein NM_071825.7
        TrEMBL UniProtAcc Q9N3U2
        UniProt_GCRP UniProtAcc Q9N3U2
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (30)
    RNASeq_FPKM (74)
    Ortholog: WBGene00107720 Pristionchus pacificus From_analysis: OMA
      WBGene00042656 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
      WBGene00057908 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00190238 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00130620 Caenorhabditis japonica From_analysis: Inparanoid_8
      CSP28.g12122 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP31.g8791 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11767 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g12171 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g16841 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3713 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00899.g14833 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-Y47D7A.13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold491.g2061 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_20411 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_019410 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_50073000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14009 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in DA neuron; VA neuron; intestine; neurons; and seam cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by forty chemicals including hydrogen sulfide; Nitric Oxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result: WBRNAi00020711 Inferred_automatically: RNAi_primary
      WBRNAi00116263 Inferred_automatically: RNAi_primary
      WBRNAi00084278 Inferred_automatically: RNAi_primary
      WBRNAi00056780 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015829
      Expr1039458
      Expr1160236
      Expr2007614
      Expr2025851
    Drives_construct: WBCnstr00024471
    Construct_product: WBCnstr00024471
    Microarray_results (16)
    Expression_cluster (350)
  Map_info: Positive: Positive_clone: Y47D7A Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -5.36669
  Reference: WBPaper00059378
  Method: Gene