WormBase Tree Display for Gene: WBGene00021580
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WBGene00021580 | SMap | S_parent | Sequence | Y46C8AL | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-174 | Person_evidence | WBPerson2531 | |||||
Sequence_name | Y46C8AL.2 | ||||||||
Molecular_name | Y46C8AL.2 | ||||||||
Y46C8AL.2.1 | |||||||||
CE40157 | |||||||||
Other_name | Y46C8AL.b | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y46C8AL.f | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
Y46C8AL.g | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y46C8AL.2 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | clec-174 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-174 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (43) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00094060 | ||||||||
Ortholog | WBGene00023668 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
WBGene00025257 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00035982 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00035983 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00035984 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00040177 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00042755 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
WBGene00035636 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
WBGene00157026 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WBGene00146363 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
WBGene00056613 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WBGene00065175 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WBGene00067104 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
WBGene00067106 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
CBOVI.g11167 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP21.g9529 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP31.g19741 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP32.g15733 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP38.g4142 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
Cang_2012_03_13_00447.g10960 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
chrIV_pilon.g10072 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (44) | |||||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y46C8AL.2 | |||||||
Corresponding_CDS_history | Y46C8AL.2:wp154 | ||||||||
Y46C8AL.2:wp156 | |||||||||
Corresponding_transcript | Y46C8AL.2.1 | ||||||||
Other_sequence | Tcir_isotig09580 | ||||||||
Experimental_info | RNAi_result | WBRNAi00092238 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020641 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027586 | ||||||||
Expr1160117 | |||||||||
Drives_construct | WBCnstr00024497 | ||||||||
Construct_product | WBCnstr00024497 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (256) | |||||||||
Interaction | WBInteraction000544080 | ||||||||
WBInteraction000571164 | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00031686 | ||||||||
WBPaper00039120 | |||||||||
WBPaper00055435 | |||||||||
WBPaper00065681 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |