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WormBase Tree Display for Gene: WBGene00021449

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Name Class

WBGene00021449SMapS_parentSequenceY39D8B
IdentityVersion3
NameCGC_namemltn-7Paper_evidenceWBPaper00036066
Person_evidenceWBPerson3379
Sequence_nameY39D8B.1
Molecular_nameY39D8B.1a
Y39D8B.1a.1
CE50773
Y39D8B.1b
CE50829
Y39D8B.1b.1
Other_nameCELE_Y39D8B.1Accession_evidenceNDBBX284605
Public_namemltn-7
DB_infoDatabaseAceViewgene5A849
WormQTLgeneWBGene00021449
WormFluxgeneWBGene00021449
NDBlocus_tagCELE_Y39D8B.1
PanthergeneCAEEL|WormBase=WBGene00021449|UniProtKB=A0A0K3ASF2
familyPTHR21523
NCBIgene189750
RefSeqproteinNM_001313308.2
NM_001313309.1
TrEMBLUniProtAccA0A0K3ASF2
A0A0K3AW06
UniProt_GCRPUniProtAccA0A0K3ASF2
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
229 Nov 2004 15:47:08WBPerson2970EventAcquires_mergeWBGene00021450
301 Apr 2010 13:55:15WBPerson2970EventSplit_intoWBGene00021450
Name_changeCGC_namemltn-7
Acquires_mergeWBGene00021450
Split_intoWBGene00021450
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmltn
Allele (76)
RNASeq_FPKM (74)
GO_annotation00001005
OrthologWBGene00024624Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00024625Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00120299Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00155918Caenorhabditis brenneriFrom_analysisOMA
WBGene00080884Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00271764Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00222360Brugia malayiFrom_analysisWormBase-Compara
WBGene00224011Brugia malayiFrom_analysisWormBase-Compara
WBGene00226382Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g1696Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3347Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g7209Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g19212Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7290Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP40.g6359Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00874.g14691Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-mltn-7Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold559.g3855Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_04136.g32169Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_020101Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01661Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11113Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_50015300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g12980Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00239160Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00243196Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00249364Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00290092Trichuris murisFrom_analysisWormBase-Compara
Paralog (13)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY39D8B.1a
Y39D8B.1b
Corresponding_CDS_historyY39D8B.1:wp131
Y39D8B.1:wp214
Y39D8B.1:wp248
Corresponding_transcriptY39D8B.1a.1
Y39D8B.1b.1
Other_sequenceHGC09273_1
Associated_featureWBsf999143
WBsf999144
WBsf1019062
Experimental_infoRNAi_resultWBRNAi00056226Inferred_automaticallyRNAi_primary
Expr_patternExpr1022949
Expr1039372
Expr1159716
Expr2013621
Expr2031854
Microarray_results (17)
Expression_cluster (31)
Map_infoMapVPosition-20.001
PositivePositive_cloneY39D8BInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00036066
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene