WormBase Tree Display for Gene: WBGene00021157

WBGene00021157 SMap: S_parent: Sequence: Y4C6B
  Identity: Version: 1
    Name: Sequence_name: Y4C6B.3
      Molecular_name: Y4C6B.3a
        Y4C6B.3a.1
        CE49466
        Y4C6B.3b
        CE49391
        Y4C6B.3c
        CE49139
        Y4C6B.3b.1
        Y4C6B.3c.1
      Other_name: Y4C6B.f Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y4C6B.3 Accession_evidence: NDB BX284604
      Public_name: Y4C6B.3
    DB_info: Database: AceView gene 4G99
        WormQTL gene WBGene00021157
        WormFlux gene WBGene00021157
        NDB locus_tag CELE_Y4C6B.3
        Panther gene CAEEL|WormBase=WBGene00021157|UniProtKB=V6CLQ0
          family PTHR45757
        NCBI gene 177313
        RefSeq protein NM_001380221.1
            NM_001380222.1
            NM_001306839.4
        TrEMBL UniProtAcc V6CLK7
            V6CJ84
            V6CLQ0
        UniProt_GCRP UniProtAcc V6CLQ0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (56)
    RNASeq_FPKM (74)
    GO_annotation: 00105303
      00105427
      00125592
      00125593
    Ortholog: WBGene00039082 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            WormBase-Compara
      WBGene00039084 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00064014 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00125006 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00098209 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP21.g768 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g769 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7035 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6442 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6473 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2484 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3855 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g226 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10851 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25175 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28299 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1152 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00155.g5774 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g13324 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold494.g2176 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01649.g22290 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11836 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013535 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10338 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40333700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10421 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00289923 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296681 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003978 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
      SGD:S000003994 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
      SGD:S000003492 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
      SGD:S000003913 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
    Paralog (60)
    Structured_description: Automated_description: Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y4C6B.3a
      Y4C6B.3b
      Y4C6B.3c
    Corresponding_CDS_history: Y4C6B.3:wp240
    Corresponding_transcript (3)
    Other_sequence: BXC04011_1
    Associated_feature: WBsf717141
  Experimental_info: RNAi_result: WBRNAi00037313 Inferred_automatically: RNAi_primary
      WBRNAi00057060 Inferred_automatically: RNAi_primary
      WBRNAi00020819 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022681
      Expr1160504
      Expr2007734
      Expr2025977
    Microarray_results (19)
    Expression_cluster (158)
    Interaction (37)
  Map_info: Positive: Positive_clone: Y4C6B Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 1.59193
  Reference: WBPaper00065331
  Method: Gene