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WormBase Tree Display for Gene: WBGene00021088

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Name Class

WBGene00021088SMapS_parentSequenceW08E12
IdentityVersion1
NameSequence_nameW08E12.7
Molecular_nameW08E12.7
W08E12.7.1
CE21275
W08E12.7.2
Other_nameCELE_W08E12.7Accession_evidenceNDBBX284604
Public_nameW08E12.7
DB_infoDatabaseAceViewgene4E61
WormQTLgeneWBGene00021088
WormFluxgeneWBGene00021088
NDBlocus_tagCELE_W08E12.7
PanthergeneCAEEL|WormBase=WBGene00021088|UniProtKB=Q9N5B3
familyPTHR10804
NCBIgene177097
RefSeqproteinNM_067910.9
TREEFAMTREEFAM_IDTF300010
TrEMBLUniProtAccQ9N5B3
UniProt_GCRPUniProtAccQ9N5B3
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (38)
RNASeq_FPKM (74)
Contained_in_operonCEOP4617
OrthologWBGene00024839Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00024840Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00143417Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131179Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00059495Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00191860Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00190477Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00226499Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g11664Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7940Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4531Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g4532Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g5572Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7138Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g12340Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g593Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6996Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g27474Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7267Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12987Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g12988Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00191.g6645Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_17252.g25638Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g14707Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_IV.g14708Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g7586Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_07645.g37999Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16340Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_014677Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08086Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7124Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40117100Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g9935Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00074200Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00240831Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00265449Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286520Trichuris murisFrom_analysisWormBase-Compara
SGD:S000002508Saccharomyces cerevisiaeFrom_analysisOrthoFinder
Panther
FB:FBgn0035630Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030131-2182Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030616-161Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:8550Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:894684Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1302994Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Paralog (8)
Structured_descriptionAutomated_descriptionExpressed in gonad and pharynx. Human PA2G4 enables nucleic acid binding activity; transcription corepressor activity; and ubiquitin protein ligase binding activity. Is predicted to encode a protein with the following domains: PA2G4 family; Winged helix DNA-binding domain superfamily; Proliferation-associated protein 2G4/ARX1; Metallopeptidase family M24; Winged helix-like DNA-binding domain superfamily; Creatinase/aminopeptidase-like; Peptidase M24; and Phosphorylation site. Is an ortholog of human PA2G4 (proliferation-associated 2G4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSW08E12.7
Corresponding_transcriptW08E12.7.1
W08E12.7.2
Other_sequence (86)
Associated_featureWBsf655016
WBsf977071
WBsf977072
WBsf977073
WBsf977074
WBsf977075
WBsf228081
WBsf228082
WBsf228083
Experimental_infoRNAi_resultWBRNAi00036382Inferred_automaticallyRNAi_primary
WBRNAi00061904Inferred_automaticallyRNAi_primary
WBRNAi00089180Inferred_automaticallyRNAi_primary
WBRNAi00054987Inferred_automaticallyRNAi_primary
WBRNAi00019719Inferred_automaticallyRNAi_primary
Expr_patternExpr7702
Expr1018825
Expr1039201
Expr1158520
Expr2006857
Expr2025082
Drives_constructWBCnstr00012847
WBCnstr00024692
WBCnstr00042402
Construct_productWBCnstr00024692
WBCnstr00042402
Microarray_results (24)
Expression_cluster (202)
Interaction (20)
Map_infoPositivePositive_cloneW08E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-4.76979
ReferenceWBPaper00024478
WBPaper00032230
WBPaper00038491
WBPaper00055090
MethodGene