WormBase Tree Display for Gene: WBGene00020436

WBGene00020436 SMap: S_parent: Sequence: T12A2
  Identity: Version: 2
    Name: CGC_name: amdh-1 Person_evidence: WBPerson42707
            WBPerson917
      Sequence_name: T12A2.1
      Molecular_name: T12A2.1
        T12A2.1.1
        CE44585
      Other_name: CELE_T12A2.1 Accession_evidence: NDB BX284603
      Public_name: amdh-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 19 Apr 2021 01:27:01 WBPerson1983 Name_change: CGC_name: amdh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: amdh
    Allele (254)
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog: WBGene00037082 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00078060 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00109529 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00195092 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g5102 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g16172 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6026 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19659 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g19671 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g14911 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g14923 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21850 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4317 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g4323 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3835 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g3842 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26476 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g26500 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11279 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01253.g16090 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02136.g16941 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02768.g17496 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_03009.g17707 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_03785.g18373 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_04002.g18537 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_06599.g20359 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_06604.g20363 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_10202.g22517 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_11723.g23390 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_17152.g25607 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T12A2.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_III.g9149 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17463 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01082.g18241 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08878 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_08880 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010765 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_010769 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04986 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g11840 Panagrellus redivivus From_analysis: WormBase-Compara
      chrIII_pilon.g7901 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00134932 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00055427 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00259463 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-160728-110 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28577 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1919011 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1308879 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable imidazolonepropionase activity. Predicted to be involved in histidine catabolic process. Predicted to be located in cytoplasm. Is an ortholog of human AMDHD1 (amidohydrolase domain containing 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T12A2.1
    Corresponding_CDS_history: T12A2.1:wp212
    Corresponding_transcript: T12A2.1.1
    Other_sequence (47)
    Associated_feature: WBsf645257
      WBsf659043
      WBsf992692
      WBsf992693
      WBsf225078
  Experimental_info: RNAi_result (13)
    Expr_pattern: Expr1013414
      Expr1038912
      Expr1156745
      Expr2006116
      Expr2024330
    Regulate_expr_cluster: WBPaper00064232:amdh-1(uth29)_downregulated
      WBPaper00064232:amdh-1(uth29)_upregulated
    Microarray_results (19)
    Expression_cluster (137)
    Interaction: WBInteraction000108874
      WBInteraction000111143
      WBInteraction000134313
      WBInteraction000282862
      WBInteraction000464857
  Map_info: Map: III Position: -1.4071
    Positive: Positive_clone: T12A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00064232
    WBPaper00065140
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene