WormBase Tree Display for Gene: WBGene00020359
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WBGene00020359 | SMap | S_parent | Sequence | T08E11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | math-40 | Person_evidence | WBPerson655 | |||
Sequence_name | T08E11.3 | ||||||
Molecular_name | T08E11.3 | ||||||
T08E11.3.1 | |||||||
CE46633 | |||||||
Other_name | CELE_T08E11.3 | Accession_evidence | NDB | BX284602 | |||
Public_name | math-40 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | math | ||||||
Allele (79) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00154588 | Caenorhabditis brenneri | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
WBGene00143314 | Caenorhabditis brenneri | From_analysis | OMA | ||||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
WBGene00070906 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00064233 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00070908 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00070910 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00060679 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00085414 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00060680 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00084683 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00070029 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00085418 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00057051 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00072684 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
WBGene00060800 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||
Csp11.Scaffold630.g19300 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||
Csp11.Scaffold630.g19304 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||
chrII_pilon.g3488 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog (85) | |||||||
Structured_description | Automated_description | Enriched in FLP; GABAergic neurons; OLL; PVD; and intestine based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including D-glucopyranose; antimycin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T08E11.3 | |||||
Corresponding_CDS_history | T08E11.3:wp228 | ||||||
Corresponding_transcript | T08E11.3.1 | ||||||
Associated_feature | WBsf220881 | ||||||
WBsf220882 | |||||||
Experimental_info | RNAi_result | WBRNAi00052873 | Inferred_automatically | RNAi_primary | |||
WBRNAi00018448 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035356 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1038868 | ||||||
Expr1156471 | |||||||
Expr2013413 | |||||||
Expr2031647 | |||||||
Microarray_results (12) | |||||||
Expression_cluster (93) | |||||||
Interaction | WBInteraction000187445 | ||||||
WBInteraction000227007 | |||||||
WBInteraction000257219 | |||||||
WBInteraction000276315 | |||||||
WBInteraction000292739 | |||||||
WBInteraction000350884 | |||||||
Map_info | Map | II | Position | -14.33 | Error | 0.003883 | |
Positive | Positive_clone | T08E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |