WormBase Tree Display for Gene: WBGene00020169

WBGene00020169 SMap: S_parent: Sequence: T02G5
  Identity: Version: 2
    Name: CGC_name: mmaa-1 Paper_evidence: WBPaper00027754
      Sequence_name: T02G5.13
      Molecular_name: T02G5.13a
        T02G5.13a.1
        CE31822
        T02G5.13b
        CE04865
        T02G5.13b.1
        T02G5.13b.2
      Other_name: CELE_T02G5.13 Accession_evidence: NDB BX284602
      Public_name: mmaa-1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Aug 2006 11:39:27 WBPerson2970 Name_change: CGC_name: mmaa-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mmaa
    Allele (19)
    Strain: WBStrain00032611
      WBStrain00036947
    RNASeq_FPKM (74)
    GO_annotation: 00074214
      00074215
      00074216
      00074217
      00074218
      00074219
      00074220
      00074221
      00124872
      00124873
    Contained_in_operon: CEOP2288
    Ortholog: WBGene00033893 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00154910 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00084811 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135350 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00218277 Caenorhabditis japonica From_analysis: TreeFam
      CBOVI.g7477 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15056 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4402 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g239 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12593 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2118 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g17413 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21344 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11709 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g18619 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8398 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00619.g12856 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mmaa-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12161 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00302.g9019 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16979 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006421 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g7014 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20263400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4936 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00256106 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288511 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-070928-15 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:18871 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1923805 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1305035 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00014202 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTPase activity. Predicted to be located in cytoplasm. Used to study methylmalonic acidemia. Human ortholog(s) of this gene implicated in methylmalonic acidemia cblA type. Is an ortholog of human MMAA (metabolism of cobalamin associated A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Experimental_model: DOID:14749 Homo sapiens Paper_evidence: WBPaper00027754
          Curator_confirmed: WBPerson324
          Date_last_updated: 19 Apr 2013 00:00:00
    Potential_model: DOID:0060742 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:18871)
  Models_disease_in_annotation: WBDOannot00000160
  Molecular_info: Corresponding_CDS: T02G5.13a
      T02G5.13b
    Corresponding_CDS_history: T02G5.13:wp84
      T02G5.13:wp127
    Corresponding_transcript: T02G5.13a.1
      T02G5.13b.1
      T02G5.13b.2
    Other_sequence (46)
    Associated_feature: WBsf223291
      WBsf223292
  Experimental_info: RNAi_result: WBRNAi00035066 Inferred_automatically: RNAi_primary
      WBRNAi00018029 Inferred_automatically: RNAi_primary
      WBRNAi00026166 Inferred_automatically: RNAi_primary
      WBRNAi00052224 Inferred_automatically: RNAi_primary
      WBRNAi00018033 Inferred_automatically: RNAi_primary
      WBRNAi00026165 Inferred_automatically: RNAi_primary
      WBRNAi00078224 Inferred_automatically: RNAi_primary
      WBRNAi00027452 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017099
      Expr1038772
      Expr1155855
      Expr2013624
      Expr2031858
    Drives_construct: WBCnstr00025327
    Construct_product: WBCnstr00025327
    Microarray_results (27)
    Expression_cluster (127)
    Interaction (38)
  Map_info (3)
  Reference: WBPaper00027754
    WBPaper00038491
    WBPaper00041771
    WBPaper00045654
    WBPaper00049828
    WBPaper00049923
    WBPaper00055090
    WBPaper00061547
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene