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WormBase Tree Display for Gene: WBGene00020163

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Name Class

WBGene00020163SMapS_parentSequenceT02G5
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (96)
StrainWBStrain00032611
WBStrain00033155
Component_of_genotypeWBGenotype00000050
RNASeq_FPKM (74)
GO_annotation00074207
00074208
00074209
OrthologWBGene00032377Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00042780Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00142964Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00208912Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00084769Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00225566Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g7773Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g498Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4404Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g4406Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1261Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17419Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g11376Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g17411Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3116Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7606Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g8401Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01242.g16062Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-T02G5.3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12164Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00302.g9021Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00302.g9022Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16977Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_006418Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02143Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_20263600Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4933Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g4935Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00138582Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00177541Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00245287Onchocerca volvulusFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-040625-115Danio rerioFrom_analysisOrthoFinder
OrthoInspector
Panther
HGNC:29379Homo sapiensFrom_analysisOrthoFinder
OrthoInspector
Panther
MGI:2385199Mus musculusFrom_analysisOrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:1561825Rattus norvegicusFrom_analysisOrthoFinder
OrthoInspector
Panther
SonicParanoid
Paralog (16)
Structured_descriptionAutomated_descriptionPredicted to be involved in positive regulation of protein localization to ciliary membrane. Predicted to be located in ciliary membrane. Predicted to be part of plasma membrane protein complex. Is an ortholog of human EFCAB7 (EF-hand calcium binding domain 7).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST02G5.3
Corresponding_CDS_historyT02G5.3:wp230
Corresponding_transcriptT02G5.3.1
Associated_featureWBsf644351
Experimental_infoRNAi_resultWBRNAi00018034Inferred_automaticallyRNAi_primary
WBRNAi00052226Inferred_automaticallyRNAi_primary
WBRNAi00052227Inferred_automaticallyRNAi_primary
WBRNAi00018029Inferred_automaticallyRNAi_primary
WBRNAi00035067Inferred_automaticallyRNAi_primary
WBRNAi00052219Inferred_automaticallyRNAi_primary
WBRNAi00018035Inferred_automaticallyRNAi_primary
WBRNAi00061871Inferred_automaticallyRNAi_primary
Expr_patternExpr1017514
Expr1038767
Expr1155852
Expr1155858
Expr1155859
Expr2005752
Expr2023966
Drives_constructWBCnstr00025331
Construct_productWBCnstr00025331
Microarray_results (39)
Expression_cluster (227)
InteractionWBInteraction000144629
WBInteraction000251397
WBInteraction000255257
WBInteraction000291241
WBInteraction000333107
WBInteraction000334803
WBInteraction000394732
WBInteraction000421120
WBInteraction000429918
WBInteraction000576725
Map_infoPositivePositive_cloneT02G5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII0.493643
ReferenceWBPaper00037843
WBPaper00038491
WBPaper00055090
MethodGene