WormBase Tree Display for Gene: WBGene00020093

WBGene00020093 SMap: S_parent: Sequence: R144
  Identity: Version: 1
    Name: Sequence_name: R144.3
      Molecular_name: R144.3a
        R144.3a.1
        CE41692
        R144.3b
        CE39271
        R144.3b.1
      Other_name: CELE_R144.3 Accession_evidence: NDB BX284603
      Public_name: R144.3
    DB_info: Database: AceView gene 3G113
            3G115
        WormQTL gene WBGene00020093
        WormFlux gene WBGene00020093
        NDB locus_tag CELE_R144.3
        Panther gene CAEEL|WormBase=WBGene00020093|UniProtKB=F5GU47
          family PTHR12901
        NCBI gene 187900
        RefSeq protein NM_001267994.3
            NM_001382857.2
        TrEMBL UniProtAcc F5GU47
            H2KZ21
        UniProt_GCRP UniProtAcc F5GU47
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (17)
    Strain: WBStrain00032834
    RNASeq_FPKM (74)
    GO_annotation: 00008648
    Contained_in_operon: CEOP3256
    Ortholog: WBGene00036436 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00132235 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00054639 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00191262 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP21.g379 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18640 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP29.g4750 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5572 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12424 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16814 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7278 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3027 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_III.g10221 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_III.g10227 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14395 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00009.g635 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12485 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009911 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g2130 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30182810 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7618 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00204338 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00262069 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00044648 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Predicted to be located in mitochondrion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R144.3a
      R144.3b
    Corresponding_CDS_history (3)
    Corresponding_transcript: R144.3a.1
      R144.3b.1
    Associated_feature: WBsf978368
      WBsf1014829
      WBsf224839
      WBsf224840
    Transcription_factor: WBTranscriptionFactor000843
  Experimental_info: RNAi_result: WBRNAi00087235 Inferred_automatically: RNAi_primary
      WBRNAi00085241 Inferred_automatically: RNAi_primary
      WBRNAi00068053 Inferred_automatically: RNAi_primary
      WBRNAi00005600 Inferred_automatically: RNAi_primary
      WBRNAi00051957 Inferred_automatically: RNAi_primary
      WBRNAi00081676 Inferred_automatically: RNAi_primary
      WBRNAi00026123 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr10421
      Expr10422
      Expr10423
      Expr1025162
      Expr1038732
      Expr1155603
      Expr2005649
      Expr2023865
    Drives_construct: WBCnstr00015317
      WBCnstr00015318
      WBCnstr00025377
    Construct_product: WBCnstr00025377
    Microarray_results (18)
    Expression_cluster (55)
    SAGE_tag: SAGE:cttgttgtgtggaaaga Strand: Sense
        Unambiguously_mapped
      SAGE:aaaaatcctaataaacg Strand: Sense
        Unambiguously_mapped
      SAGE:tcaaattgtt Strand: Antisense
      SAGE:aaaaatccta Strand: Sense
        Unambiguously_mapped
      SAGE:tcaaagttacggtaacc Strand: Sense
        Unambiguously_mapped
      SAGE:aaaattaaca Strand: Antisense
      SAGE:cacccaaatc Strand: Antisense
      SAGE:gctgagtatt Strand: Antisense
      SAGE:cttgttgtgt Strand: Sense
        Unambiguously_mapped
      SAGE:gctgagtattttctttt Strand: Antisense
    Interaction (81)
  Map_info: Positive: Positive_clone: R144 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -2.2185
  Method: Gene