WormBase Tree Display for Gene: WBGene00020082

WBGene00020082 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 2
    Name: CGC_name: gcp-2.1 Person_evidence: WBPerson683
      Sequence_name: R57.1
      Molecular_name: R57.1a
        R57.1a.1
        CE30114
        R57.1b
        CE37270
        R57.1c
        CE12844
        R57.1b.1
        R57.1c.1
      Other_name: CELE_R57.1 Accession_evidence: NDB BX284606
      Public_name: gcp-2.1
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 17 Apr 2013 09:53:02 WBPerson2970 Name_change: CGC_name: gcp-2.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gcp
    Allele (109)
    Strain: WBStrain00031761
    RNASeq_FPKM (74)
    GO_annotation (12)
    Ortholog: WBGene00104565 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060315 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00023900 Caenorhabditis briggsae From_analysis: OrthoMCL
            WormBase-Compara
      WBGene00030030 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00121872 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00191277 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222874 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g11886 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2869 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g3534 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13452 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20701 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14693 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16549 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14615 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g27719 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19536 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00034.g1966 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_II.g4895 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_X.g22319 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold549.g3587 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00424.g11186 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03296 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_022114 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11328 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4054 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g4055 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g4056 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g9106 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0024600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18252 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240042 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00118631 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00257137 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000003887 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040426-1025 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3788 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:14526 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:23536 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:13636 Homo sapiens From_analysis: Inparanoid
            OrthoFinder
            PhylomeDB
            SonicParanoid
      MGI:1858193 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:1919810 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2685810 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:620987 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:70963 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1305872 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00007954 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00044121 Caenorhabditis elegans From_analysis: TreeFam
            Panther
    Structured_description: Automated_description: Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in membrane. Is an ortholog of human FOLH1 (folate hydrolase 1); NAALAD2 (N-acetylated alpha-linked acidic dipeptidase 2); and NAALADL1 (N-acetylated alpha-linked acidic dipeptidase like 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:7693 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3788)
      DOID:3526 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3788)
  Molecular_info: Corresponding_CDS: R57.1a
      R57.1b
      R57.1c
    Corresponding_CDS_history: R57.1a:wp98
      R57.1a:wp129
      R57.1b:wp98
      R57.1b:wp129
    Corresponding_transcript: R57.1a.1
      R57.1b.1
      R57.1c.1
    Other_sequence (51)
    Associated_feature: WBsf662403
      WBsf235252
      WBsf235253
  Experimental_info: RNAi_result: WBRNAi00052044 Inferred_automatically: RNAi_primary
      WBRNAi00017915 Inferred_automatically: RNAi_primary
      WBRNAi00034973 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010413
      Expr1038722
      Expr1155679
      Expr2011970
      Expr2030207
    Drives_construct (2)
    Construct_product: WBCnstr00025382
    Microarray_results (31)
    Expression_cluster (169)
    Interaction (48)
  Map_info: Map: X Position: -20.1873
    Positive: Positive_clone: R57 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049244
    WBPaper00055090
    WBPaper00066339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene