WormBase Tree Display for Gene: WBGene00019819

WBGene00019819 SMap: S_parent: Sequence: R02D3
  Identity: Version: 2
    Name (5)
    DB_info: Database: AceView gene 4B3
        WormQTL gene WBGene00019819
        WormFlux gene WBGene00019819
        NDB locus_tag CELE_R02D3.1
        Panther gene CAEEL|WormBase=WBGene00019819|UniProtKB=U4PFH6
          family PTHR11133
        NCBI gene 176842
        RefSeq protein NM_001307729.4
            NM_067483.6
        TrEMBL UniProtAcc U4PFH6
            O44503
        UniProt_GCRP UniProtAcc U4PFH6
        OMIM gene 605113
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 16 Jan 2018 11:32:43 WBPerson1983 Name_change: CGC_name: aass-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aass
    Allele (82)
    Strain: WBStrain00031714
    RNASeq_FPKM (74)
    GO_annotation: 00032586
      00032587
      00032588
      00032589
      00032590
      00032591
      00032592
      00032593
      00032594
      00032595
    Ortholog: WBGene00064560 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00034300 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00142917 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125944 Caenorhabditis japonica From_analysis: OMA
      WBGene00106812 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g8603 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14549 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g14550 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14025 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2680 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22245 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g4670 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5299 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6905 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15468 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23959 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00589.g12546 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_04248.g18711 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_11247.g23129 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-R02D3.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10709 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01309.g20025 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15661 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016303 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13720 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g10177 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40021000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9466 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00216716 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00266430 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000005333 Saccharomyces cerevisiae From_analysis: OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0286198 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-061220-8 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:17366 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1353573 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310811 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Structured_description (2)
  Disease_info: Potential_model: DOID:9274 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:17366)
  Molecular_info: Corresponding_CDS: R02D3.1a
      R02D3.1b
    Corresponding_transcript: R02D3.1a.1
      R02D3.1b.1
    Other_sequence (74)
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00051122 Inferred_automatically: RNAi_primary
      WBRNAi00017312 Inferred_automatically: RNAi_primary
      WBRNAi00017315 Inferred_automatically: RNAi_primary
      WBRNAi00034526 Inferred_automatically: RNAi_primary
      WBRNAi00078534 Inferred_automatically: RNAi_primary
      WBRNAi00078635 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr14637
      Expr14640
      Expr1022640
      Expr1038586
      Expr1154831
      Expr2005313
      Expr2023533
    Drives_construct: WBCnstr00025572
      WBCnstr00041188
      WBCnstr00041191
    Construct_product: WBCnstr00025572
    Microarray_results (22)
    Expression_cluster (191)
    Interaction (39)
  Map_info: Map: IV Position: -26.7789
    Positive: Positive_clone: R02D3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00055974
    WBPaper00065272
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene