WormBase Tree Display for Gene: WBGene00019730

WBGene00019730 SMap: S_parent: Sequence: M02D8
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: asns
    Allele (49)
    Strain: WBStrain00032964
    RNASeq_FPKM (74)
    GO_annotation (14)
    Ortholog: WBGene00035706 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00065556 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00146089 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136259 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00108227 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00112483 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153180 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00132292 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00053115 Caenorhabditis remanei From_analysis: TreeFam
      CBOVI.g3612 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13144 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g667 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11702 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23554 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g24663 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g8842 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4776 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19868 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g19969 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g19615 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00359.g9712 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_24560.g27182 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-asns-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00238.g7703 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_02087 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025239 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07572 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5737 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0172000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19638 Caenorhabditis elegans From_analysis: WormBase-Compara
      SGD:S000003356 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000006349 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0270926 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1091 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            SonicParanoid
      HGNC:753 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            SonicParanoid
      MGI:1350929 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            SonicParanoid
      RGD:2162 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            SonicParanoid
    Paralog: WBGene00003816 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010889 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable asparagine synthase (glutamine-hydrolyzing) activity. Predicted to be involved in asparagine biosynthetic process. Predicted to be located in cytosol. Is an ortholog of human ASNS (asparagine synthetase (glutamine-hydrolyzing)). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M02D8.4
    Corresponding_CDS_history: M02D8.4b:wp272
      M02D8.4c:wp272
    Corresponding_transcript: M02D8.4.1
    Other_sequence (80)
    Associated_feature (11)
  Experimental_info: RNAi_result: WBRNAi00034382 Inferred_automatically: RNAi_primary
      WBRNAi00050817 Inferred_automatically: RNAi_primary
      WBRNAi00017126 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram732
      Expr6409
      Expr1012141
      Expr1038531
      Expr1154509
      Expr2009458
      Expr2027696
    Drives_construct: WBCnstr00004112
      WBCnstr00025642
    Construct_product: WBCnstr00025642
    Microarray_results (31)
    Expression_cluster (400)
    Interaction (74)
  Map_info: Map: X Position: 0.344226 Error: 0.020848
    Positive: Positive_clone: M02D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00032232
    WBPaper00038491
    WBPaper00040135
    WBPaper00055090
    WBPaper00065819
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene