WormBase Tree Display for Gene: WBGene00019563

WBGene00019563 SMap: S_parent: Sequence: K09C6
  Identity: Version: 1
    Name: Sequence_name: K09C6.9
      Molecular_name: K09C6.9
        K09C6.9.1
        CE40091
      Other_name: CELE_K09C6.9 Accession_evidence: NDB BX284605
      Public_name: K09C6.9
    DB_info: Database: AceView gene 5B330
        WormQTL gene WBGene00019563
        WormFlux gene WBGene00019563
        NDB locus_tag CELE_K09C6.9
        Panther gene CAEEL|WormBase=WBGene00019563|UniProtKB=O16945
          family PTHR36161
        NCBI gene 187204
        RefSeq protein NM_070942.8
        TREEFAM TREEFAM_ID TF316897
        TrEMBL UniProtAcc O16945
        UniProt_GCRP UniProtAcc O16945
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (37)
    RNASeq_FPKM (74)
    Ortholog: WBGene00028664 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00122236 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00136123 Caenorhabditis japonica From_analysis: OMA
            WormBase-Compara
      WBGene00082427 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147597 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147109 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g1037 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12940 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g16016 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g16018 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g16019 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5770 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21972 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g21973 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10563 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g10564 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g10565 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10640 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14082 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g14083 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g14084 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1696 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g1697 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g4950 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g11655 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g11656 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11047 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00029.g1700 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00064.g3135 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00421.g10638 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g18239 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21471 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02565.g27037 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_019133 Caenorhabditis remanei From_analysis: WormBase-Compara
      chrV_pilon.g13138 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00127189 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00130094 Caenorhabditis japonica From_analysis: WormBase-Compara
    Paralog: WBGene00011244 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011245 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012612 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00020155 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020156 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in amphid sheath cell and intestine based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-one chemicals including nicotinic acid; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K09C6.9
    Corresponding_CDS_history: K09C6.9:wp88
      K09C6.9:wp107
      K09C6.9:wp156
    Corresponding_transcript: K09C6.9.1
    Other_sequence: FD515831.1
      CRC03554_1
      CSC01140_1
    Associated_feature: WBsf999219
      WBsf999220
      WBsf1019111
      WBsf233298
      WBsf233299
  Experimental_info (7)
  Map_info: Positive: Positive_clone: K09C6 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -19.9479
  Reference: WBPaper00064543
  Method: Gene